Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LHX6Q9UPM6 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.42■□□□□ 0.86
LHX6Q9UPM6 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LHX6Q9UPM6 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
LHX6Q9UPM6 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LHX6Q9UPM6 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.42■□□□□ 0.86
LHX6Q9UPM6 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.42■□□□□ 0.86
LHX6Q9UPM6 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
LHX6Q9UPM6 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.42■□□□□ 0.86
LHX6Q9UPM6 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
LHX6Q9UPM6 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.42■□□□□ 0.86
LHX6Q9UPM6 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
LHX6Q9UPM6 REXO1L12P-201ENST00000622156 912 ntBASIC20.42■□□□□ 0.86
LHX6Q9UPM6 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.42■□□□□ 0.86
LHX6Q9UPM6 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LHX6Q9UPM6 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
LHX6Q9UPM6 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
LHX6Q9UPM6 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
LHX6Q9UPM6 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.41■□□□□ 0.86
LHX6Q9UPM6 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LHX6Q9UPM6 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LHX6Q9UPM6 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LHX6Q9UPM6 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LHX6Q9UPM6 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
LHX6Q9UPM6 MIPEPP3-201ENST00000412105 444 ntBASIC20.41■□□□□ 0.86
LHX6Q9UPM6 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.41■□□□□ 0.86
LHX6Q9UPM6 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC20.41■□□□□ 0.86
LHX6Q9UPM6 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
LHX6Q9UPM6 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.41■□□□□ 0.86
LHX6Q9UPM6 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.41■□□□□ 0.86
LHX6Q9UPM6 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.41■□□□□ 0.86
LHX6Q9UPM6 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
LHX6Q9UPM6 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
LHX6Q9UPM6 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
LHX6Q9UPM6 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.41■□□□□ 0.86
LHX6Q9UPM6 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LHX6Q9UPM6 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
LHX6Q9UPM6 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
LHX6Q9UPM6 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.4■□□□□ 0.86
LHX6Q9UPM6 PEX7-202ENST00000367756 680 ntTSL 3 BASIC20.4■□□□□ 0.86
LHX6Q9UPM6 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
LHX6Q9UPM6 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.4■□□□□ 0.86
LHX6Q9UPM6 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
LHX6Q9UPM6 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
LHX6Q9UPM6 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC20.4■□□□□ 0.86
LHX6Q9UPM6 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
LHX6Q9UPM6 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
LHX6Q9UPM6 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.4■□□□□ 0.86
LHX6Q9UPM6 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.4■□□□□ 0.86
LHX6Q9UPM6 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.4■□□□□ 0.86
LHX6Q9UPM6 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LHX6Q9UPM6 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
LHX6Q9UPM6 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
LHX6Q9UPM6 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
LHX6Q9UPM6 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
LHX6Q9UPM6 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.39■□□□□ 0.86
LHX6Q9UPM6 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
LHX6Q9UPM6 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
LHX6Q9UPM6 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
LHX6Q9UPM6 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC20.39■□□□□ 0.85
LHX6Q9UPM6 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.39■□□□□ 0.85
LHX6Q9UPM6 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
LHX6Q9UPM6 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
LHX6Q9UPM6 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
LHX6Q9UPM6 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.39■□□□□ 0.85
LHX6Q9UPM6 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
LHX6Q9UPM6 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.39■□□□□ 0.85
LHX6Q9UPM6 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.39■□□□□ 0.85
LHX6Q9UPM6 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
LHX6Q9UPM6 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
LHX6Q9UPM6 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
LHX6Q9UPM6 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
LHX6Q9UPM6 AC104187.1-201ENST00000607510 612 ntBASIC20.39■□□□□ 0.85
LHX6Q9UPM6 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.39■□□□□ 0.85
LHX6Q9UPM6 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LHX6Q9UPM6 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LHX6Q9UPM6 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LHX6Q9UPM6 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LHX6Q9UPM6 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
LHX6Q9UPM6 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LHX6Q9UPM6 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
LHX6Q9UPM6 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
LHX6Q9UPM6 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
LHX6Q9UPM6 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
LHX6Q9UPM6 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.38■□□□□ 0.85
LHX6Q9UPM6 MYCNOS-205ENST00000641950 531 ntBASIC20.38■□□□□ 0.85
LHX6Q9UPM6 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.38■□□□□ 0.85
LHX6Q9UPM6 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LHX6Q9UPM6 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.37■□□□□ 0.85
LHX6Q9UPM6 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.37■□□□□ 0.85
LHX6Q9UPM6 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.37■□□□□ 0.85
LHX6Q9UPM6 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.37■□□□□ 0.85
LHX6Q9UPM6 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
LHX6Q9UPM6 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
LHX6Q9UPM6 MIR718-201ENST00000390190 70 ntBASIC20.37■□□□□ 0.85
LHX6Q9UPM6 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.37■□□□□ 0.85
LHX6Q9UPM6 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.37■□□□□ 0.85
LHX6Q9UPM6 UBE2SP1-201ENST00000450587 669 ntBASIC20.37■□□□□ 0.85
LHX6Q9UPM6 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
LHX6Q9UPM6 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms