Protein–RNA interactions for Protein: Q9UN72

PCDHA7, Protocadherin alpha-7, humanhuman

Predictions only

Length 937 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA7Q9UN72 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
PCDHA7Q9UN72 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
PCDHA7Q9UN72 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
PCDHA7Q9UN72 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC24.59■■□□□ 1.53
PCDHA7Q9UN72 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC24.59■■□□□ 1.53
PCDHA7Q9UN72 SRD5A1P1-201ENST00000442297 786 ntBASIC24.59■■□□□ 1.53
PCDHA7Q9UN72 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC24.59■■□□□ 1.53
PCDHA7Q9UN72 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
PCDHA7Q9UN72 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
PCDHA7Q9UN72 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC24.58■■□□□ 1.53
PCDHA7Q9UN72 OR2I1P-207ENST00000453522 948 ntBASIC24.58■■□□□ 1.53
PCDHA7Q9UN72 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC24.58■■□□□ 1.53
PCDHA7Q9UN72 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC24.58■■□□□ 1.53
PCDHA7Q9UN72 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC24.58■■□□□ 1.53
PCDHA7Q9UN72 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
PCDHA7Q9UN72 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
PCDHA7Q9UN72 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
PCDHA7Q9UN72 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC24.58■■□□□ 1.52
PCDHA7Q9UN72 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC24.57■■□□□ 1.52
PCDHA7Q9UN72 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
PCDHA7Q9UN72 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
PCDHA7Q9UN72 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC24.57■■□□□ 1.52
PCDHA7Q9UN72 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
PCDHA7Q9UN72 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC24.57■■□□□ 1.52
PCDHA7Q9UN72 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
PCDHA7Q9UN72 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
PCDHA7Q9UN72 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
PCDHA7Q9UN72 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
PCDHA7Q9UN72 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC24.57■■□□□ 1.52
PCDHA7Q9UN72 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC24.57■■□□□ 1.52
PCDHA7Q9UN72 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC24.57■■□□□ 1.52
PCDHA7Q9UN72 AC010525.1-201ENST00000585559 441 ntBASIC24.57■■□□□ 1.52
PCDHA7Q9UN72 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
PCDHA7Q9UN72 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC24.56■■□□□ 1.52
PCDHA7Q9UN72 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
PCDHA7Q9UN72 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC24.56■■□□□ 1.52
PCDHA7Q9UN72 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC24.56■■□□□ 1.52
PCDHA7Q9UN72 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
PCDHA7Q9UN72 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
PCDHA7Q9UN72 AC005229.4-201ENST00000610085 2198 ntBASIC24.56■■□□□ 1.52
PCDHA7Q9UN72 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC24.56■■□□□ 1.52
PCDHA7Q9UN72 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC24.55■■□□□ 1.52
PCDHA7Q9UN72 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
PCDHA7Q9UN72 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC24.55■■□□□ 1.52
PCDHA7Q9UN72 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
PCDHA7Q9UN72 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC24.55■■□□□ 1.52
PCDHA7Q9UN72 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC24.55■■□□□ 1.52
PCDHA7Q9UN72 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
PCDHA7Q9UN72 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
PCDHA7Q9UN72 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
PCDHA7Q9UN72 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
PCDHA7Q9UN72 RBM38-205ENST00000440234 686 ntTSL 2 BASIC24.55■■□□□ 1.52
PCDHA7Q9UN72 AL356441.2-201ENST00000443009 864 ntBASIC24.55■■□□□ 1.52
PCDHA7Q9UN72 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC24.55■■□□□ 1.52
PCDHA7Q9UN72 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC24.55■■□□□ 1.52
PCDHA7Q9UN72 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
PCDHA7Q9UN72 OR7E47P-201ENST00000546390 1422 ntBASIC24.54■■□□□ 1.52
PCDHA7Q9UN72 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC24.54■■□□□ 1.52
PCDHA7Q9UN72 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
PCDHA7Q9UN72 SRR-208ENST00000576848 588 ntTSL 4 BASIC24.54■■□□□ 1.52
PCDHA7Q9UN72 MIR4466-201ENST00000606121 54 ntBASIC24.54■■□□□ 1.52
PCDHA7Q9UN72 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
PCDHA7Q9UN72 AC068587.7-201ENST00000641602 218 ntBASIC24.54■■□□□ 1.52
PCDHA7Q9UN72 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
PCDHA7Q9UN72 PALM-208ENST00000592155 2272 ntTSL 4 BASIC24.54■■□□□ 1.52
PCDHA7Q9UN72 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
PCDHA7Q9UN72 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.52
PCDHA7Q9UN72 TUB-203ENST00000534099 1759 ntTSL 2 BASIC24.53■■□□□ 1.52
PCDHA7Q9UN72 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC24.53■■□□□ 1.52
PCDHA7Q9UN72 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC24.53■■□□□ 1.52
PCDHA7Q9UN72 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC24.53■■□□□ 1.52
PCDHA7Q9UN72 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
PCDHA7Q9UN72 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC24.53■■□□□ 1.52
PCDHA7Q9UN72 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.52
PCDHA7Q9UN72 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC24.52■■□□□ 1.52
PCDHA7Q9UN72 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
PCDHA7Q9UN72 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
PCDHA7Q9UN72 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC24.52■■□□□ 1.52
PCDHA7Q9UN72 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
PCDHA7Q9UN72 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC24.52■■□□□ 1.52
PCDHA7Q9UN72 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
PCDHA7Q9UN72 AC092171.4-201ENST00000609130 632 ntBASIC24.52■■□□□ 1.52
PCDHA7Q9UN72 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
PCDHA7Q9UN72 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
PCDHA7Q9UN72 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC24.51■■□□□ 1.51
PCDHA7Q9UN72 Z98882.1-201ENST00000622160 2253 ntBASIC24.51■■□□□ 1.51
PCDHA7Q9UN72 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
PCDHA7Q9UN72 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
PCDHA7Q9UN72 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC24.51■■□□□ 1.51
PCDHA7Q9UN72 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
PCDHA7Q9UN72 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
PCDHA7Q9UN72 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
PCDHA7Q9UN72 RPP21-222ENST00000433076 577 ntTSL 2 BASIC24.51■■□□□ 1.51
PCDHA7Q9UN72 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC24.51■■□□□ 1.51
PCDHA7Q9UN72 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
PCDHA7Q9UN72 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC24.51■■□□□ 1.51
PCDHA7Q9UN72 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
PCDHA7Q9UN72 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC24.51■■□□□ 1.51
PCDHA7Q9UN72 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
PCDHA7Q9UN72 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms