Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
UBQLN4Q9NRR5 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.77
UBQLN4Q9NRR5 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
UBQLN4Q9NRR5 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
UBQLN4Q9NRR5 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.89■□□□□ 0.77
UBQLN4Q9NRR5 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.89■□□□□ 0.77
UBQLN4Q9NRR5 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
UBQLN4Q9NRR5 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
UBQLN4Q9NRR5 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
UBQLN4Q9NRR5 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
UBQLN4Q9NRR5 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
UBQLN4Q9NRR5 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
UBQLN4Q9NRR5 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
UBQLN4Q9NRR5 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
UBQLN4Q9NRR5 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
UBQLN4Q9NRR5 AC142381.2-201ENST00000566120 298 ntBASIC19.88■□□□□ 0.77
UBQLN4Q9NRR5 AC005837.3-201ENST00000612163 286 ntBASIC19.88■□□□□ 0.77
UBQLN4Q9NRR5 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
UBQLN4Q9NRR5 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.88■□□□□ 0.77
UBQLN4Q9NRR5 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
UBQLN4Q9NRR5 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.88■□□□□ 0.77
UBQLN4Q9NRR5 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.88■□□□□ 0.77
UBQLN4Q9NRR5 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
UBQLN4Q9NRR5 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
UBQLN4Q9NRR5 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
UBQLN4Q9NRR5 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.87■□□□□ 0.77
UBQLN4Q9NRR5 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.87■□□□□ 0.77
UBQLN4Q9NRR5 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
UBQLN4Q9NRR5 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.87■□□□□ 0.77
UBQLN4Q9NRR5 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
UBQLN4Q9NRR5 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
UBQLN4Q9NRR5 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
UBQLN4Q9NRR5 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
UBQLN4Q9NRR5 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
UBQLN4Q9NRR5 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
UBQLN4Q9NRR5 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
UBQLN4Q9NRR5 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
UBQLN4Q9NRR5 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
UBQLN4Q9NRR5 C11orf96-202ENST00000528572 1834 ntBASIC19.86■□□□□ 0.77
UBQLN4Q9NRR5 TSPY26P-201ENST00000476365 1326 ntBASIC19.86■□□□□ 0.77
UBQLN4Q9NRR5 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
UBQLN4Q9NRR5 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.86■□□□□ 0.77
UBQLN4Q9NRR5 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.86■□□□□ 0.77
UBQLN4Q9NRR5 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
UBQLN4Q9NRR5 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
UBQLN4Q9NRR5 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
UBQLN4Q9NRR5 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
UBQLN4Q9NRR5 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
UBQLN4Q9NRR5 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
UBQLN4Q9NRR5 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
UBQLN4Q9NRR5 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
UBQLN4Q9NRR5 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.85■□□□□ 0.77
UBQLN4Q9NRR5 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
UBQLN4Q9NRR5 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
UBQLN4Q9NRR5 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
UBQLN4Q9NRR5 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.85■□□□□ 0.77
UBQLN4Q9NRR5 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
UBQLN4Q9NRR5 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.85■□□□□ 0.77
UBQLN4Q9NRR5 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
UBQLN4Q9NRR5 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.85■□□□□ 0.77
UBQLN4Q9NRR5 MIR638-201ENST00000385237 100 ntBASIC19.85■□□□□ 0.77
UBQLN4Q9NRR5 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.85■□□□□ 0.77
UBQLN4Q9NRR5 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.85■□□□□ 0.77
UBQLN4Q9NRR5 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
UBQLN4Q9NRR5 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
UBQLN4Q9NRR5 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
UBQLN4Q9NRR5 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.85■□□□□ 0.77
UBQLN4Q9NRR5 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
UBQLN4Q9NRR5 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
UBQLN4Q9NRR5 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
UBQLN4Q9NRR5 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UBQLN4Q9NRR5 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
UBQLN4Q9NRR5 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.84■□□□□ 0.77
UBQLN4Q9NRR5 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.84■□□□□ 0.77
UBQLN4Q9NRR5 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
UBQLN4Q9NRR5 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
UBQLN4Q9NRR5 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UBQLN4Q9NRR5 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UBQLN4Q9NRR5 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.84■□□□□ 0.77
UBQLN4Q9NRR5 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.84■□□□□ 0.77
UBQLN4Q9NRR5 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.83■□□□□ 0.77
UBQLN4Q9NRR5 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.83■□□□□ 0.77
UBQLN4Q9NRR5 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
UBQLN4Q9NRR5 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
UBQLN4Q9NRR5 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
UBQLN4Q9NRR5 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
UBQLN4Q9NRR5 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.83■□□□□ 0.77
UBQLN4Q9NRR5 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
UBQLN4Q9NRR5 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.83■□□□□ 0.77
UBQLN4Q9NRR5 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.83■□□□□ 0.77
UBQLN4Q9NRR5 AL034346.1-201ENST00000568244 1277 ntBASIC19.83■□□□□ 0.77
UBQLN4Q9NRR5 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.83■□□□□ 0.77
UBQLN4Q9NRR5 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
UBQLN4Q9NRR5 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
UBQLN4Q9NRR5 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
UBQLN4Q9NRR5 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
UBQLN4Q9NRR5 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
UBQLN4Q9NRR5 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
UBQLN4Q9NRR5 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
UBQLN4Q9NRR5 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms