Protein–RNA interactions for Protein: Q9HD34

LYRM4, LYR motif-containing protein 4, humanhuman

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM4Q9HD34 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
LYRM4Q9HD34 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LYRM4Q9HD34 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.37■□□□□ 0.85
LYRM4Q9HD34 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
LYRM4Q9HD34 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
LYRM4Q9HD34 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LYRM4Q9HD34 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
LYRM4Q9HD34 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
LYRM4Q9HD34 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LYRM4Q9HD34 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LYRM4Q9HD34 AC012414.1-201ENST00000556676 535 ntBASIC20.37■□□□□ 0.85
LYRM4Q9HD34 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.37■□□□□ 0.85
LYRM4Q9HD34 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.37■□□□□ 0.85
LYRM4Q9HD34 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.37■□□□□ 0.85
LYRM4Q9HD34 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LYRM4Q9HD34 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LYRM4Q9HD34 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LYRM4Q9HD34 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
LYRM4Q9HD34 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.37■□□□□ 0.85
LYRM4Q9HD34 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.36■□□□□ 0.85
LYRM4Q9HD34 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.36■□□□□ 0.85
LYRM4Q9HD34 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LYRM4Q9HD34 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LYRM4Q9HD34 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
LYRM4Q9HD34 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LYRM4Q9HD34 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
LYRM4Q9HD34 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.36■□□□□ 0.85
LYRM4Q9HD34 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.36■□□□□ 0.85
LYRM4Q9HD34 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LYRM4Q9HD34 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
LYRM4Q9HD34 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.36■□□□□ 0.85
LYRM4Q9HD34 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.36■□□□□ 0.85
LYRM4Q9HD34 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.36■□□□□ 0.85
LYRM4Q9HD34 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LYRM4Q9HD34 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.36■□□□□ 0.85
LYRM4Q9HD34 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.36■□□□□ 0.85
LYRM4Q9HD34 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LYRM4Q9HD34 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LYRM4Q9HD34 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
LYRM4Q9HD34 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
LYRM4Q9HD34 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LYRM4Q9HD34 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LYRM4Q9HD34 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LYRM4Q9HD34 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.35■□□□□ 0.85
LYRM4Q9HD34 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LYRM4Q9HD34 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LYRM4Q9HD34 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LYRM4Q9HD34 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.35■□□□□ 0.85
LYRM4Q9HD34 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.35■□□□□ 0.85
LYRM4Q9HD34 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LYRM4Q9HD34 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LYRM4Q9HD34 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.35■□□□□ 0.85
LYRM4Q9HD34 AP004607.7-201ENST00000527152 1677 ntBASIC20.35■□□□□ 0.85
LYRM4Q9HD34 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.35■□□□□ 0.85
LYRM4Q9HD34 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LYRM4Q9HD34 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LYRM4Q9HD34 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LYRM4Q9HD34 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LYRM4Q9HD34 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LYRM4Q9HD34 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.34■□□□□ 0.85
LYRM4Q9HD34 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LYRM4Q9HD34 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.34■□□□□ 0.85
LYRM4Q9HD34 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.34■□□□□ 0.85
LYRM4Q9HD34 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.34■□□□□ 0.85
LYRM4Q9HD34 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.34■□□□□ 0.85
LYRM4Q9HD34 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.34■□□□□ 0.85
LYRM4Q9HD34 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.34■□□□□ 0.85
LYRM4Q9HD34 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LYRM4Q9HD34 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
LYRM4Q9HD34 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LYRM4Q9HD34 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.34■□□□□ 0.85
LYRM4Q9HD34 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LYRM4Q9HD34 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.33■□□□□ 0.85
LYRM4Q9HD34 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LYRM4Q9HD34 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
LYRM4Q9HD34 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LYRM4Q9HD34 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.33■□□□□ 0.85
LYRM4Q9HD34 ZNRF2P3-201ENST00000424200 374 ntBASIC20.33■□□□□ 0.85
LYRM4Q9HD34 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.33■□□□□ 0.85
LYRM4Q9HD34 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LYRM4Q9HD34 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.33■□□□□ 0.85
LYRM4Q9HD34 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
LYRM4Q9HD34 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
LYRM4Q9HD34 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
LYRM4Q9HD34 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
LYRM4Q9HD34 BX005040.4-201ENST00000637145 1518 ntBASIC20.32■□□□□ 0.84
LYRM4Q9HD34 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LYRM4Q9HD34 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LYRM4Q9HD34 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
LYRM4Q9HD34 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LYRM4Q9HD34 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LYRM4Q9HD34 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LYRM4Q9HD34 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.32■□□□□ 0.84
LYRM4Q9HD34 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.32■□□□□ 0.84
LYRM4Q9HD34 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.32■□□□□ 0.84
LYRM4Q9HD34 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LYRM4Q9HD34 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.32■□□□□ 0.84
LYRM4Q9HD34 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LYRM4Q9HD34 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LYRM4Q9HD34 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms