Protein–RNA interactions for Protein: Q9HCN4

GPN1, GPN-loop GTPase 1, humanhuman

Predicted RBP Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1Q9HCN4 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
GPN1Q9HCN4 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
GPN1Q9HCN4 AC092296.2-201ENST00000589470 999 ntBASIC18.31■□□□□ 0.52
GPN1Q9HCN4 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
GPN1Q9HCN4 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC18.31■□□□□ 0.52
GPN1Q9HCN4 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GPN1Q9HCN4 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
GPN1Q9HCN4 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
GPN1Q9HCN4 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.31■□□□□ 0.52
GPN1Q9HCN4 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.3■□□□□ 0.52
GPN1Q9HCN4 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GPN1Q9HCN4 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.3■□□□□ 0.52
GPN1Q9HCN4 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
GPN1Q9HCN4 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
GPN1Q9HCN4 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
GPN1Q9HCN4 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
GPN1Q9HCN4 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
GPN1Q9HCN4 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
GPN1Q9HCN4 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC18.3■□□□□ 0.52
GPN1Q9HCN4 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC18.3■□□□□ 0.52
GPN1Q9HCN4 ECEL1P2-201ENST00000461596 1295 ntBASIC18.3■□□□□ 0.52
GPN1Q9HCN4 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
GPN1Q9HCN4 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
GPN1Q9HCN4 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GPN1Q9HCN4 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
GPN1Q9HCN4 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
GPN1Q9HCN4 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GPN1Q9HCN4 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
GPN1Q9HCN4 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GPN1Q9HCN4 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GPN1Q9HCN4 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
GPN1Q9HCN4 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GPN1Q9HCN4 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
GPN1Q9HCN4 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
GPN1Q9HCN4 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
GPN1Q9HCN4 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
GPN1Q9HCN4 RNF166-209ENST00000567844 633 ntTSL 5 BASIC18.29■□□□□ 0.52
GPN1Q9HCN4 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GPN1Q9HCN4 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GPN1Q9HCN4 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.29■□□□□ 0.52
GPN1Q9HCN4 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GPN1Q9HCN4 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.29■□□□□ 0.52
GPN1Q9HCN4 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC18.29■□□□□ 0.52
GPN1Q9HCN4 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
GPN1Q9HCN4 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.29■□□□□ 0.52
GPN1Q9HCN4 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
GPN1Q9HCN4 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
GPN1Q9HCN4 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GPN1Q9HCN4 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GPN1Q9HCN4 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.28■□□□□ 0.52
GPN1Q9HCN4 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.28■□□□□ 0.52
GPN1Q9HCN4 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
GPN1Q9HCN4 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
GPN1Q9HCN4 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC18.28■□□□□ 0.52
GPN1Q9HCN4 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.28■□□□□ 0.52
GPN1Q9HCN4 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
GPN1Q9HCN4 GFER-205ENST00000569451 517 ntTSL 5 BASIC18.28■□□□□ 0.52
GPN1Q9HCN4 AC026202.3-201ENST00000600805 1127 ntBASIC18.28■□□□□ 0.52
GPN1Q9HCN4 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
GPN1Q9HCN4 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
GPN1Q9HCN4 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.28■□□□□ 0.52
GPN1Q9HCN4 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
GPN1Q9HCN4 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.28■□□□□ 0.52
GPN1Q9HCN4 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.28■□□□□ 0.52
GPN1Q9HCN4 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.28■□□□□ 0.52
GPN1Q9HCN4 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
GPN1Q9HCN4 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
GPN1Q9HCN4 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
GPN1Q9HCN4 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
GPN1Q9HCN4 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.27■□□□□ 0.52
GPN1Q9HCN4 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
GPN1Q9HCN4 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
GPN1Q9HCN4 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.27■□□□□ 0.52
GPN1Q9HCN4 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
GPN1Q9HCN4 RAP2CP1-202ENST00000605179 643 ntBASIC18.27■□□□□ 0.52
GPN1Q9HCN4 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
GPN1Q9HCN4 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
GPN1Q9HCN4 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
GPN1Q9HCN4 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
GPN1Q9HCN4 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
GPN1Q9HCN4 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
GPN1Q9HCN4 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
GPN1Q9HCN4 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
GPN1Q9HCN4 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
GPN1Q9HCN4 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
GPN1Q9HCN4 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
GPN1Q9HCN4 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
GPN1Q9HCN4 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC18.26■□□□□ 0.51
GPN1Q9HCN4 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
GPN1Q9HCN4 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
GPN1Q9HCN4 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
GPN1Q9HCN4 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
GPN1Q9HCN4 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
GPN1Q9HCN4 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
GPN1Q9HCN4 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
GPN1Q9HCN4 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
GPN1Q9HCN4 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
GPN1Q9HCN4 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
GPN1Q9HCN4 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
GPN1Q9HCN4 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms