Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC25.53■■□□□ 1.68
RNF41Q9H4P4 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC25.53■■□□□ 1.68
RNF41Q9H4P4 AC242852.2-201ENST00000615738 1807 ntBASIC25.53■■□□□ 1.68
RNF41Q9H4P4 GUSBP5-202ENST00000510805 1989 ntBASIC25.53■■□□□ 1.68
RNF41Q9H4P4 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
RNF41Q9H4P4 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
RNF41Q9H4P4 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
RNF41Q9H4P4 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC25.52■■□□□ 1.68
RNF41Q9H4P4 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC25.52■■□□□ 1.68
RNF41Q9H4P4 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
RNF41Q9H4P4 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC25.52■■□□□ 1.68
RNF41Q9H4P4 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC25.52■■□□□ 1.68
RNF41Q9H4P4 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
RNF41Q9H4P4 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC25.52■■□□□ 1.68
RNF41Q9H4P4 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC25.52■■□□□ 1.68
RNF41Q9H4P4 AP004607.7-201ENST00000527152 1677 ntBASIC25.52■■□□□ 1.68
RNF41Q9H4P4 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
RNF41Q9H4P4 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
RNF41Q9H4P4 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
RNF41Q9H4P4 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC25.51■■□□□ 1.67
RNF41Q9H4P4 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC25.51■■□□□ 1.67
RNF41Q9H4P4 AC009237.3-201ENST00000393279 1427 ntBASIC25.51■■□□□ 1.67
RNF41Q9H4P4 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
RNF41Q9H4P4 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
RNF41Q9H4P4 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
RNF41Q9H4P4 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
RNF41Q9H4P4 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
RNF41Q9H4P4 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
RNF41Q9H4P4 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
RNF41Q9H4P4 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
RNF41Q9H4P4 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC25.5■■□□□ 1.67
RNF41Q9H4P4 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC25.5■■□□□ 1.67
RNF41Q9H4P4 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
RNF41Q9H4P4 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
RNF41Q9H4P4 AC097381.1-201ENST00000429019 1296 ntBASIC25.5■■□□□ 1.67
RNF41Q9H4P4 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC25.5■■□□□ 1.67
RNF41Q9H4P4 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
RNF41Q9H4P4 TERT-206ENST00000508104 2486 ntTSL 5 BASIC25.5■■□□□ 1.67
RNF41Q9H4P4 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC25.5■■□□□ 1.67
RNF41Q9H4P4 RARRES2P6-201ENST00000567333 442 ntBASIC25.5■■□□□ 1.67
RNF41Q9H4P4 AC133561.1-201ENST00000568600 2415 ntBASIC25.5■■□□□ 1.67
RNF41Q9H4P4 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
RNF41Q9H4P4 TPRG1LP1-201ENST00000598702 760 ntBASIC25.5■■□□□ 1.67
RNF41Q9H4P4 MIR6821-201ENST00000617625 74 ntBASIC25.5■■□□□ 1.67
RNF41Q9H4P4 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC25.49■■□□□ 1.67
RNF41Q9H4P4 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
RNF41Q9H4P4 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
RNF41Q9H4P4 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
RNF41Q9H4P4 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
RNF41Q9H4P4 LINC02228-203ENST00000641970 1355 ntBASIC25.49■■□□□ 1.67
RNF41Q9H4P4 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC25.49■■□□□ 1.67
RNF41Q9H4P4 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
RNF41Q9H4P4 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
RNF41Q9H4P4 MIR935-201ENST00000401179 91 ntBASIC25.49■■□□□ 1.67
RNF41Q9H4P4 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
RNF41Q9H4P4 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC25.49■■□□□ 1.67
RNF41Q9H4P4 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC25.49■■□□□ 1.67
RNF41Q9H4P4 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
RNF41Q9H4P4 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
RNF41Q9H4P4 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
RNF41Q9H4P4 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
RNF41Q9H4P4 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
RNF41Q9H4P4 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC25.48■■□□□ 1.67
RNF41Q9H4P4 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
RNF41Q9H4P4 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
RNF41Q9H4P4 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC25.48■■□□□ 1.67
RNF41Q9H4P4 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
RNF41Q9H4P4 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC25.48■■□□□ 1.67
RNF41Q9H4P4 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC25.48■■□□□ 1.67
RNF41Q9H4P4 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
RNF41Q9H4P4 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
RNF41Q9H4P4 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC25.47■■□□□ 1.67
RNF41Q9H4P4 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
RNF41Q9H4P4 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
RNF41Q9H4P4 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC25.47■■□□□ 1.67
RNF41Q9H4P4 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC25.47■■□□□ 1.67
RNF41Q9H4P4 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
RNF41Q9H4P4 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC25.47■■□□□ 1.67
RNF41Q9H4P4 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC25.47■■□□□ 1.67
RNF41Q9H4P4 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
RNF41Q9H4P4 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
RNF41Q9H4P4 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
RNF41Q9H4P4 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC25.47■■□□□ 1.67
RNF41Q9H4P4 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC25.47■■□□□ 1.67
RNF41Q9H4P4 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
RNF41Q9H4P4 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
RNF41Q9H4P4 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC25.46■■□□□ 1.67
RNF41Q9H4P4 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
RNF41Q9H4P4 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
RNF41Q9H4P4 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC25.46■■□□□ 1.67
RNF41Q9H4P4 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
RNF41Q9H4P4 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC25.46■■□□□ 1.67
RNF41Q9H4P4 AC026271.2-201ENST00000428091 497 ntBASIC25.46■■□□□ 1.67
RNF41Q9H4P4 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC25.46■■□□□ 1.67
RNF41Q9H4P4 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC25.46■■□□□ 1.67
RNF41Q9H4P4 RAB43-208ENST00000615093 783 ntTSL 5 BASIC25.46■■□□□ 1.67
RNF41Q9H4P4 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
RNF41Q9H4P4 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
RNF41Q9H4P4 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
RNF41Q9H4P4 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC25.46■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms