Protein–RNA interactions for Protein: Q9H267

VPS33B, Vacuolar protein sorting-associated protein 33B, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33BQ9H267 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
VPS33BQ9H267 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC26.31■■□□□ 1.8
VPS33BQ9H267 BET1L-204ENST00000410108 637 ntTSL 3 BASIC26.31■■□□□ 1.8
VPS33BQ9H267 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC26.31■■□□□ 1.8
VPS33BQ9H267 AC079089.2-201ENST00000531211 1277 ntBASIC26.31■■□□□ 1.8
VPS33BQ9H267 MARS-234ENST00000630571 216 ntTSL 5 BASIC26.31■■□□□ 1.8
VPS33BQ9H267 MARS-235ENST00000630803 183 ntTSL 3 BASIC26.31■■□□□ 1.8
VPS33BQ9H267 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
VPS33BQ9H267 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
VPS33BQ9H267 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
VPS33BQ9H267 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC26.31■■□□□ 1.8
VPS33BQ9H267 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
VPS33BQ9H267 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
VPS33BQ9H267 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC26.3■■□□□ 1.8
VPS33BQ9H267 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC26.3■■□□□ 1.8
VPS33BQ9H267 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
VPS33BQ9H267 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
VPS33BQ9H267 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
VPS33BQ9H267 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC26.3■■□□□ 1.8
VPS33BQ9H267 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC26.3■■□□□ 1.8
VPS33BQ9H267 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC26.3■■□□□ 1.8
VPS33BQ9H267 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
VPS33BQ9H267 AC098934.4-201ENST00000564127 592 ntBASIC26.3■■□□□ 1.8
VPS33BQ9H267 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
VPS33BQ9H267 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC26.3■■□□□ 1.8
VPS33BQ9H267 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
VPS33BQ9H267 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
VPS33BQ9H267 AC068338.2-201ENST00000563278 1430 ntBASIC26.3■■□□□ 1.8
VPS33BQ9H267 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC26.3■■□□□ 1.8
VPS33BQ9H267 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC26.3■■□□□ 1.8
VPS33BQ9H267 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
VPS33BQ9H267 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
VPS33BQ9H267 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
VPS33BQ9H267 MIPEPP3-201ENST00000412105 444 ntBASIC26.29■■□□□ 1.8
VPS33BQ9H267 AL512625.2-201ENST00000417533 625 ntBASIC26.29■■□□□ 1.8
VPS33BQ9H267 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC26.29■■□□□ 1.8
VPS33BQ9H267 AC093827.2-201ENST00000512654 315 ntBASIC26.29■■□□□ 1.8
VPS33BQ9H267 OR10C1-204ENST00000622521 1039 ntBASIC26.29■■□□□ 1.8
VPS33BQ9H267 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC26.29■■□□□ 1.8
VPS33BQ9H267 AC004812.2-201ENST00000611079 2094 ntBASIC26.29■■□□□ 1.8
VPS33BQ9H267 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC26.29■■□□□ 1.8
VPS33BQ9H267 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC26.28■■□□□ 1.8
VPS33BQ9H267 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
VPS33BQ9H267 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
VPS33BQ9H267 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC26.28■■□□□ 1.8
VPS33BQ9H267 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
VPS33BQ9H267 DET1-205ENST00000558413 583 ntTSL 4 BASIC26.28■■□□□ 1.8
VPS33BQ9H267 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
VPS33BQ9H267 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC26.28■■□□□ 1.8
VPS33BQ9H267 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC26.28■■□□□ 1.8
VPS33BQ9H267 DUSP8P5-201ENST00000422884 1815 ntBASIC26.28■■□□□ 1.8
VPS33BQ9H267 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
VPS33BQ9H267 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC26.27■■□□□ 1.8
VPS33BQ9H267 PPP1R14BP2-201ENST00000426284 444 ntBASIC26.27■■□□□ 1.8
VPS33BQ9H267 UQCRFS1P1-201ENST00000435169 820 ntBASIC26.27■■□□□ 1.8
VPS33BQ9H267 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
VPS33BQ9H267 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
VPS33BQ9H267 CREM-210ENST00000374721 2020 ntTSL 5 BASIC26.26■■□□□ 1.79
VPS33BQ9H267 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
VPS33BQ9H267 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC26.26■■□□□ 1.79
VPS33BQ9H267 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC26.26■■□□□ 1.79
VPS33BQ9H267 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
VPS33BQ9H267 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC26.26■■□□□ 1.79
VPS33BQ9H267 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC26.26■■□□□ 1.79
VPS33BQ9H267 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC26.26■■□□□ 1.79
VPS33BQ9H267 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC26.26■■□□□ 1.79
VPS33BQ9H267 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC26.26■■□□□ 1.79
VPS33BQ9H267 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
VPS33BQ9H267 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
VPS33BQ9H267 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC26.25■■□□□ 1.79
VPS33BQ9H267 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC26.25■■□□□ 1.79
VPS33BQ9H267 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
VPS33BQ9H267 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC26.25■■□□□ 1.79
VPS33BQ9H267 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
VPS33BQ9H267 KRT18P29-201ENST00000397031 1267 ntBASIC26.25■■□□□ 1.79
VPS33BQ9H267 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC26.25■■□□□ 1.79
VPS33BQ9H267 EEF1DP3-203ENST00000566025 782 ntBASIC26.25■■□□□ 1.79
VPS33BQ9H267 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC26.25■■□□□ 1.79
VPS33BQ9H267 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC26.25■■□□□ 1.79
VPS33BQ9H267 AC092118.2-201ENST00000613495 667 ntBASIC26.25■■□□□ 1.79
VPS33BQ9H267 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC26.25■■□□□ 1.79
VPS33BQ9H267 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
VPS33BQ9H267 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
VPS33BQ9H267 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
VPS33BQ9H267 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
VPS33BQ9H267 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
VPS33BQ9H267 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
VPS33BQ9H267 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC26.24■■□□□ 1.79
VPS33BQ9H267 MKRN4P-201ENST00000444706 1521 ntBASIC26.24■■□□□ 1.79
VPS33BQ9H267 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
VPS33BQ9H267 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC26.24■■□□□ 1.79
VPS33BQ9H267 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
VPS33BQ9H267 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC26.24■■□□□ 1.79
VPS33BQ9H267 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
VPS33BQ9H267 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
VPS33BQ9H267 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
VPS33BQ9H267 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC26.24■■□□□ 1.79
VPS33BQ9H267 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC26.24■■□□□ 1.79
VPS33BQ9H267 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
VPS33BQ9H267 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC26.24■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms