Protein–RNA interactions for Protein: Q9H254

SPTBN4, Spectrin beta chain, non-erythrocytic 4, humanhuman

Predictions only

Length 2,564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4Q9H254 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
SPTBN4Q9H254 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC21.02■□□□□ 0.96
SPTBN4Q9H254 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SPTBN4Q9H254 MFF-207ENST00000409565 1548 ntTSL 2 BASIC21.02■□□□□ 0.96
SPTBN4Q9H254 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC21.02■□□□□ 0.96
SPTBN4Q9H254 AC005224.4-201ENST00000583262 1652 ntBASIC21.02■□□□□ 0.95
SPTBN4Q9H254 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.95
SPTBN4Q9H254 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SPTBN4Q9H254 AC087499.1-201ENST00000418141 1075 ntBASIC21.01■□□□□ 0.95
SPTBN4Q9H254 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
SPTBN4Q9H254 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC21.01■□□□□ 0.95
SPTBN4Q9H254 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC21.01■□□□□ 0.95
SPTBN4Q9H254 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
SPTBN4Q9H254 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC21.01■□□□□ 0.95
SPTBN4Q9H254 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC21.01■□□□□ 0.95
SPTBN4Q9H254 AC092865.7-201ENST00000641832 219 ntBASIC21.01■□□□□ 0.95
SPTBN4Q9H254 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SPTBN4Q9H254 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SPTBN4Q9H254 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SPTBN4Q9H254 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SPTBN4Q9H254 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SPTBN4Q9H254 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC21.01■□□□□ 0.95
SPTBN4Q9H254 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SPTBN4Q9H254 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC21■□□□□ 0.95
SPTBN4Q9H254 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SPTBN4Q9H254 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SPTBN4Q9H254 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21■□□□□ 0.95
SPTBN4Q9H254 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC21■□□□□ 0.95
SPTBN4Q9H254 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC21■□□□□ 0.95
SPTBN4Q9H254 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21■□□□□ 0.95
SPTBN4Q9H254 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SPTBN4Q9H254 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.99■□□□□ 0.95
SPTBN4Q9H254 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.99■□□□□ 0.95
SPTBN4Q9H254 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SPTBN4Q9H254 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.99■□□□□ 0.95
SPTBN4Q9H254 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.99■□□□□ 0.95
SPTBN4Q9H254 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.99■□□□□ 0.95
SPTBN4Q9H254 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SPTBN4Q9H254 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.99■□□□□ 0.95
SPTBN4Q9H254 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC20.99■□□□□ 0.95
SPTBN4Q9H254 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
SPTBN4Q9H254 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SPTBN4Q9H254 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.99■□□□□ 0.95
SPTBN4Q9H254 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
SPTBN4Q9H254 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SPTBN4Q9H254 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SPTBN4Q9H254 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SPTBN4Q9H254 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.99■□□□□ 0.95
SPTBN4Q9H254 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SPTBN4Q9H254 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SPTBN4Q9H254 SPIB-206ENST00000596074 847 ntTSL 2 BASIC20.98■□□□□ 0.95
SPTBN4Q9H254 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC20.98■□□□□ 0.95
SPTBN4Q9H254 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SPTBN4Q9H254 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SPTBN4Q9H254 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SPTBN4Q9H254 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SPTBN4Q9H254 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
SPTBN4Q9H254 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC20.98■□□□□ 0.95
SPTBN4Q9H254 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.98■□□□□ 0.95
SPTBN4Q9H254 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
SPTBN4Q9H254 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SPTBN4Q9H254 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SPTBN4Q9H254 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.97■□□□□ 0.95
SPTBN4Q9H254 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SPTBN4Q9H254 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.97■□□□□ 0.95
SPTBN4Q9H254 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.97■□□□□ 0.95
SPTBN4Q9H254 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SPTBN4Q9H254 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SPTBN4Q9H254 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.97■□□□□ 0.95
SPTBN4Q9H254 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.97■□□□□ 0.95
SPTBN4Q9H254 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SPTBN4Q9H254 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SPTBN4Q9H254 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SPTBN4Q9H254 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC20.96■□□□□ 0.95
SPTBN4Q9H254 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SPTBN4Q9H254 KRT17P2-201ENST00000300992 1314 ntBASIC20.96■□□□□ 0.95
SPTBN4Q9H254 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SPTBN4Q9H254 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC20.96■□□□□ 0.95
SPTBN4Q9H254 AL355075.4-201ENST00000554988 638 ntBASIC20.96■□□□□ 0.95
SPTBN4Q9H254 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SPTBN4Q9H254 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SPTBN4Q9H254 ALDH1A3-203ENST00000557963 1670 ntBASIC20.96■□□□□ 0.95
SPTBN4Q9H254 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC20.95■□□□□ 0.95
SPTBN4Q9H254 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
SPTBN4Q9H254 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.95
SPTBN4Q9H254 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.95■□□□□ 0.95
SPTBN4Q9H254 AL049637.2-201ENST00000641778 930 ntBASIC20.95■□□□□ 0.95
SPTBN4Q9H254 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.95■□□□□ 0.94
SPTBN4Q9H254 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.95■□□□□ 0.94
SPTBN4Q9H254 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SPTBN4Q9H254 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.95■□□□□ 0.94
SPTBN4Q9H254 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC20.94■□□□□ 0.94
SPTBN4Q9H254 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
SPTBN4Q9H254 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.94■□□□□ 0.94
SPTBN4Q9H254 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
SPTBN4Q9H254 TPM4P1-201ENST00000436100 807 ntBASIC20.94■□□□□ 0.94
SPTBN4Q9H254 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
SPTBN4Q9H254 AC010141.2-201ENST00000452426 721 ntBASIC20.94■□□□□ 0.94
SPTBN4Q9H254 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.94■□□□□ 0.94
SPTBN4Q9H254 AC233263.1-201ENST00000578059 224 ntBASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms