Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC12.77□□□□□ -0.36
LIMD2Q9BT23 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC12.77□□□□□ -0.36
LIMD2Q9BT23 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
LIMD2Q9BT23 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC12.77□□□□□ -0.36
LIMD2Q9BT23 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
LIMD2Q9BT23 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
LIMD2Q9BT23 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.36
LIMD2Q9BT23 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
LIMD2Q9BT23 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
LIMD2Q9BT23 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
LIMD2Q9BT23 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
LIMD2Q9BT23 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
LIMD2Q9BT23 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
LIMD2Q9BT23 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
LIMD2Q9BT23 LSM4-201ENST00000252816 986 ntTSL 2 BASIC12.77□□□□□ -0.37
LIMD2Q9BT23 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
LIMD2Q9BT23 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LIMD2Q9BT23 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC12.77□□□□□ -0.37
LIMD2Q9BT23 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LIMD2Q9BT23 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LIMD2Q9BT23 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LIMD2Q9BT23 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC12.77□□□□□ -0.37
LIMD2Q9BT23 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
LIMD2Q9BT23 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
LIMD2Q9BT23 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LIMD2Q9BT23 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
LIMD2Q9BT23 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LIMD2Q9BT23 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC12.77□□□□□ -0.37
LIMD2Q9BT23 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LIMD2Q9BT23 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LIMD2Q9BT23 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC12.77□□□□□ -0.37
LIMD2Q9BT23 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
LIMD2Q9BT23 AC009102.2-201ENST00000606772 1639 ntBASIC12.77□□□□□ -0.37
LIMD2Q9BT23 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
LIMD2Q9BT23 GCA-201ENST00000233612 1694 ntTSL 2 BASIC12.77□□□□□ -0.37
LIMD2Q9BT23 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC12.77□□□□□ -0.37
LIMD2Q9BT23 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC12.76□□□□□ -0.37
LIMD2Q9BT23 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LIMD2Q9BT23 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC12.76□□□□□ -0.37
LIMD2Q9BT23 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC12.76□□□□□ -0.37
LIMD2Q9BT23 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LIMD2Q9BT23 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LIMD2Q9BT23 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
LIMD2Q9BT23 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
LIMD2Q9BT23 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LIMD2Q9BT23 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LIMD2Q9BT23 UNC93B8-201ENST00000511903 705 ntBASIC12.76□□□□□ -0.37
LIMD2Q9BT23 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LIMD2Q9BT23 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
LIMD2Q9BT23 NKILA-201ENST00000613231 537 ntTSL 4 BASIC12.76□□□□□ -0.37
LIMD2Q9BT23 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
LIMD2Q9BT23 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LIMD2Q9BT23 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
LIMD2Q9BT23 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC12.76□□□□□ -0.37
LIMD2Q9BT23 AC127496.7-201ENST00000625110 1798 ntBASIC12.76□□□□□ -0.37
LIMD2Q9BT23 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC12.76□□□□□ -0.37
LIMD2Q9BT23 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LIMD2Q9BT23 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC12.76□□□□□ -0.37
LIMD2Q9BT23 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
LIMD2Q9BT23 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
LIMD2Q9BT23 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LIMD2Q9BT23 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LIMD2Q9BT23 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LIMD2Q9BT23 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LIMD2Q9BT23 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
LIMD2Q9BT23 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LIMD2Q9BT23 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC12.75□□□□□ -0.37
LIMD2Q9BT23 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LIMD2Q9BT23 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
LIMD2Q9BT23 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
LIMD2Q9BT23 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
LIMD2Q9BT23 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LIMD2Q9BT23 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
LIMD2Q9BT23 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
LIMD2Q9BT23 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
LIMD2Q9BT23 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LIMD2Q9BT23 GRAMD4P7-201ENST00000578182 1232 ntBASIC12.75□□□□□ -0.37
LIMD2Q9BT23 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LIMD2Q9BT23 C17orf82-201ENST00000623772 1530 ntBASIC12.75□□□□□ -0.37
LIMD2Q9BT23 EP400NL-214ENST00000641289 2402 ntBASIC12.75□□□□□ -0.37
LIMD2Q9BT23 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LIMD2Q9BT23 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LIMD2Q9BT23 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
LIMD2Q9BT23 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LIMD2Q9BT23 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC12.74□□□□□ -0.37
LIMD2Q9BT23 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LIMD2Q9BT23 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LIMD2Q9BT23 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LIMD2Q9BT23 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
LIMD2Q9BT23 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LIMD2Q9BT23 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LIMD2Q9BT23 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LIMD2Q9BT23 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LIMD2Q9BT23 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC12.74□□□□□ -0.37
LIMD2Q9BT23 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LIMD2Q9BT23 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LIMD2Q9BT23 GUSBP5-201ENST00000418136 578 ntBASIC12.74□□□□□ -0.37
LIMD2Q9BT23 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC12.74□□□□□ -0.37
LIMD2Q9BT23 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
LIMD2Q9BT23 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms