Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.22■□□□□ 0.51
HDHD3Q9BSH5 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC18.22■□□□□ 0.51
HDHD3Q9BSH5 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
HDHD3Q9BSH5 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
HDHD3Q9BSH5 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
HDHD3Q9BSH5 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.21■□□□□ 0.51
HDHD3Q9BSH5 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
HDHD3Q9BSH5 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC18.21■□□□□ 0.51
HDHD3Q9BSH5 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC18.21■□□□□ 0.51
HDHD3Q9BSH5 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.21■□□□□ 0.51
HDHD3Q9BSH5 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HDHD3Q9BSH5 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.21■□□□□ 0.51
HDHD3Q9BSH5 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC18.21■□□□□ 0.51
HDHD3Q9BSH5 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.21■□□□□ 0.51
HDHD3Q9BSH5 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HDHD3Q9BSH5 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.21■□□□□ 0.51
HDHD3Q9BSH5 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
HDHD3Q9BSH5 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HDHD3Q9BSH5 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
HDHD3Q9BSH5 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
HDHD3Q9BSH5 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
HDHD3Q9BSH5 AF106564.1-201ENST00000607058 2553 ntBASIC18.2■□□□□ 0.5
HDHD3Q9BSH5 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
HDHD3Q9BSH5 AC009299.2-201ENST00000482477 511 ntBASIC18.2■□□□□ 0.5
HDHD3Q9BSH5 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC18.2■□□□□ 0.5
HDHD3Q9BSH5 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
HDHD3Q9BSH5 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.2■□□□□ 0.5
HDHD3Q9BSH5 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HDHD3Q9BSH5 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HDHD3Q9BSH5 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
HDHD3Q9BSH5 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HDHD3Q9BSH5 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HDHD3Q9BSH5 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
HDHD3Q9BSH5 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HDHD3Q9BSH5 Z98882.1-201ENST00000622160 2253 ntBASIC18.19■□□□□ 0.5
HDHD3Q9BSH5 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.19■□□□□ 0.5
HDHD3Q9BSH5 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
HDHD3Q9BSH5 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HDHD3Q9BSH5 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC18.19■□□□□ 0.5
HDHD3Q9BSH5 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC18.19■□□□□ 0.5
HDHD3Q9BSH5 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HDHD3Q9BSH5 AC026471.6-201ENST00000622954 1905 ntBASIC18.19■□□□□ 0.5
HDHD3Q9BSH5 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
HDHD3Q9BSH5 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HDHD3Q9BSH5 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HDHD3Q9BSH5 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HDHD3Q9BSH5 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC18.18■□□□□ 0.5
HDHD3Q9BSH5 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HDHD3Q9BSH5 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HDHD3Q9BSH5 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
HDHD3Q9BSH5 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC18.18■□□□□ 0.5
HDHD3Q9BSH5 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
HDHD3Q9BSH5 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC18.18■□□□□ 0.5
HDHD3Q9BSH5 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HDHD3Q9BSH5 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC18.18■□□□□ 0.5
HDHD3Q9BSH5 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
HDHD3Q9BSH5 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
HDHD3Q9BSH5 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HDHD3Q9BSH5 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HDHD3Q9BSH5 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HDHD3Q9BSH5 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC18.17■□□□□ 0.5
HDHD3Q9BSH5 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.17■□□□□ 0.5
HDHD3Q9BSH5 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HDHD3Q9BSH5 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
HDHD3Q9BSH5 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HDHD3Q9BSH5 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HDHD3Q9BSH5 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HDHD3Q9BSH5 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HDHD3Q9BSH5 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
HDHD3Q9BSH5 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HDHD3Q9BSH5 UNC93B8-201ENST00000511903 705 ntBASIC18.17■□□□□ 0.5
HDHD3Q9BSH5 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC18.17■□□□□ 0.5
HDHD3Q9BSH5 AL451085.2-201ENST00000605085 799 ntBASIC18.17■□□□□ 0.5
HDHD3Q9BSH5 AL117332.1-201ENST00000622628 974 ntBASIC18.17■□□□□ 0.5
HDHD3Q9BSH5 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC18.17■□□□□ 0.5
HDHD3Q9BSH5 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC18.17■□□□□ 0.5
HDHD3Q9BSH5 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HDHD3Q9BSH5 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HDHD3Q9BSH5 GTSE1-AS1-202ENST00000623117 1518 ntBASIC18.17■□□□□ 0.5
HDHD3Q9BSH5 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HDHD3Q9BSH5 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HDHD3Q9BSH5 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
HDHD3Q9BSH5 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.16■□□□□ 0.5
HDHD3Q9BSH5 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HDHD3Q9BSH5 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
HDHD3Q9BSH5 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HDHD3Q9BSH5 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HDHD3Q9BSH5 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC18.16■□□□□ 0.5
HDHD3Q9BSH5 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HDHD3Q9BSH5 AC006455.2-201ENST00000429931 906 ntBASIC18.16■□□□□ 0.5
HDHD3Q9BSH5 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HDHD3Q9BSH5 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HDHD3Q9BSH5 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HDHD3Q9BSH5 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HDHD3Q9BSH5 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.15■□□□□ 0.5
HDHD3Q9BSH5 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HDHD3Q9BSH5 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
HDHD3Q9BSH5 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HDHD3Q9BSH5 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
HDHD3Q9BSH5 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms