Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.06■□□□□ 0.96
NPAS2Q99743 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NPAS2Q99743 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NPAS2Q99743 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NPAS2Q99743 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NPAS2Q99743 SRD5A1P1-201ENST00000442297 786 ntBASIC21.06■□□□□ 0.96
NPAS2Q99743 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NPAS2Q99743 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC21.06■□□□□ 0.96
NPAS2Q99743 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
NPAS2Q99743 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
NPAS2Q99743 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
NPAS2Q99743 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NPAS2Q99743 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NPAS2Q99743 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
NPAS2Q99743 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NPAS2Q99743 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NPAS2Q99743 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC21.05■□□□□ 0.96
NPAS2Q99743 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
NPAS2Q99743 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
NPAS2Q99743 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NPAS2Q99743 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NPAS2Q99743 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
NPAS2Q99743 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
NPAS2Q99743 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NPAS2Q99743 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NPAS2Q99743 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NPAS2Q99743 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
NPAS2Q99743 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
NPAS2Q99743 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.04■□□□□ 0.96
NPAS2Q99743 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC21.04■□□□□ 0.96
NPAS2Q99743 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.04■□□□□ 0.96
NPAS2Q99743 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NPAS2Q99743 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.04■□□□□ 0.96
NPAS2Q99743 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NPAS2Q99743 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
NPAS2Q99743 AC009102.2-201ENST00000606772 1639 ntBASIC21.04■□□□□ 0.96
NPAS2Q99743 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
NPAS2Q99743 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
NPAS2Q99743 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
NPAS2Q99743 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
NPAS2Q99743 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NPAS2Q99743 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
NPAS2Q99743 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
NPAS2Q99743 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NPAS2Q99743 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
NPAS2Q99743 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.03■□□□□ 0.96
NPAS2Q99743 UNC93B3-201ENST00000308076 687 ntBASIC21.03■□□□□ 0.96
NPAS2Q99743 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC21.03■□□□□ 0.96
NPAS2Q99743 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NPAS2Q99743 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NPAS2Q99743 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NPAS2Q99743 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.03■□□□□ 0.96
NPAS2Q99743 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NPAS2Q99743 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NPAS2Q99743 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NPAS2Q99743 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NPAS2Q99743 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NPAS2Q99743 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NPAS2Q99743 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NPAS2Q99743 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NPAS2Q99743 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
NPAS2Q99743 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
NPAS2Q99743 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC21.01■□□□□ 0.95
NPAS2Q99743 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
NPAS2Q99743 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.01■□□□□ 0.95
NPAS2Q99743 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NPAS2Q99743 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
NPAS2Q99743 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC21.01■□□□□ 0.95
NPAS2Q99743 AC005837.3-201ENST00000612163 286 ntBASIC21.01■□□□□ 0.95
NPAS2Q99743 AC106739.1-201ENST00000617035 715 ntBASIC21.01■□□□□ 0.95
NPAS2Q99743 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
NPAS2Q99743 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.01■□□□□ 0.95
NPAS2Q99743 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.01■□□□□ 0.95
NPAS2Q99743 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.01■□□□□ 0.95
NPAS2Q99743 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.01■□□□□ 0.95
NPAS2Q99743 LINC01960-201ENST00000563759 1884 ntBASIC21.01■□□□□ 0.95
NPAS2Q99743 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21■□□□□ 0.95
NPAS2Q99743 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NPAS2Q99743 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NPAS2Q99743 PBX2P1-201ENST00000493219 1291 ntBASIC21■□□□□ 0.95
NPAS2Q99743 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC21■□□□□ 0.95
NPAS2Q99743 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC21■□□□□ 0.95
NPAS2Q99743 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NPAS2Q99743 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
NPAS2Q99743 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21■□□□□ 0.95
NPAS2Q99743 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
NPAS2Q99743 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.99■□□□□ 0.95
NPAS2Q99743 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NPAS2Q99743 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
NPAS2Q99743 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NPAS2Q99743 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NPAS2Q99743 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NPAS2Q99743 AC133561.4-201ENST00000566112 224 ntBASIC20.99■□□□□ 0.95
NPAS2Q99743 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NPAS2Q99743 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NPAS2Q99743 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NPAS2Q99743 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
NPAS2Q99743 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NPAS2Q99743 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NPAS2Q99743 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms