Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
CALR3Q96L12 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
CALR3Q96L12 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC22.83■■□□□ 1.25
CALR3Q96L12 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC22.83■■□□□ 1.25
CALR3Q96L12 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC22.83■■□□□ 1.25
CALR3Q96L12 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC22.83■■□□□ 1.25
CALR3Q96L12 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
CALR3Q96L12 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
CALR3Q96L12 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CALR3Q96L12 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC22.82■■□□□ 1.24
CALR3Q96L12 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CALR3Q96L12 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC22.82■■□□□ 1.24
CALR3Q96L12 STX4-202ENST00000394998 1498 ntTSL 2 BASIC22.82■■□□□ 1.24
CALR3Q96L12 UNC93B8-201ENST00000511903 705 ntBASIC22.82■■□□□ 1.24
CALR3Q96L12 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC22.82■■□□□ 1.24
CALR3Q96L12 AL451085.2-201ENST00000605085 799 ntBASIC22.82■■□□□ 1.24
CALR3Q96L12 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
CALR3Q96L12 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CALR3Q96L12 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CALR3Q96L12 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
CALR3Q96L12 EI24-211ENST00000534546 1544 ntTSL 2 BASIC22.82■■□□□ 1.24
CALR3Q96L12 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CALR3Q96L12 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC22.81■■□□□ 1.24
CALR3Q96L12 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
CALR3Q96L12 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CALR3Q96L12 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC22.81■■□□□ 1.24
CALR3Q96L12 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC22.81■■□□□ 1.24
CALR3Q96L12 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
CALR3Q96L12 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC22.81■■□□□ 1.24
CALR3Q96L12 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CALR3Q96L12 CREM-229ENST00000474362 1030 ntTSL 2 BASIC22.81■■□□□ 1.24
CALR3Q96L12 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC22.81■■□□□ 1.24
CALR3Q96L12 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC22.81■■□□□ 1.24
CALR3Q96L12 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
CALR3Q96L12 OR7E47P-201ENST00000546390 1422 ntBASIC22.81■■□□□ 1.24
CALR3Q96L12 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CALR3Q96L12 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
CALR3Q96L12 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
CALR3Q96L12 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
CALR3Q96L12 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
CALR3Q96L12 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
CALR3Q96L12 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
CALR3Q96L12 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC22.8■■□□□ 1.24
CALR3Q96L12 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC22.8■■□□□ 1.24
CALR3Q96L12 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC22.8■■□□□ 1.24
CALR3Q96L12 pRNA.6-201ENST00000610482 90 ntBASIC22.8■■□□□ 1.24
CALR3Q96L12 pRNA.5-201ENST00000612139 90 ntBASIC22.8■■□□□ 1.24
CALR3Q96L12 pRNA.11-201ENST00000618423 90 ntBASIC22.8■■□□□ 1.24
CALR3Q96L12 pRNA.13-201ENST00000619112 90 ntBASIC22.8■■□□□ 1.24
CALR3Q96L12 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC22.8■■□□□ 1.24
CALR3Q96L12 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC22.79■■□□□ 1.24
CALR3Q96L12 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
CALR3Q96L12 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
CALR3Q96L12 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
CALR3Q96L12 AK3-203ENST00000447596 705 ntTSL 2 BASIC22.79■■□□□ 1.24
CALR3Q96L12 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC22.79■■□□□ 1.24
CALR3Q96L12 AC104564.3-201ENST00000582367 638 ntBASIC22.79■■□□□ 1.24
CALR3Q96L12 AC092171.4-201ENST00000609130 632 ntBASIC22.79■■□□□ 1.24
CALR3Q96L12 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
CALR3Q96L12 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
CALR3Q96L12 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC22.79■■□□□ 1.24
CALR3Q96L12 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
CALR3Q96L12 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
CALR3Q96L12 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
CALR3Q96L12 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC22.79■■□□□ 1.24
CALR3Q96L12 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
CALR3Q96L12 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
CALR3Q96L12 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
CALR3Q96L12 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
CALR3Q96L12 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
CALR3Q96L12 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
CALR3Q96L12 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC22.78■■□□□ 1.24
CALR3Q96L12 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC22.78■■□□□ 1.24
CALR3Q96L12 AC087239.1-201ENST00000622671 572 ntBASIC22.78■■□□□ 1.24
CALR3Q96L12 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC22.78■■□□□ 1.24
CALR3Q96L12 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
CALR3Q96L12 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
CALR3Q96L12 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
CALR3Q96L12 RBM38-205ENST00000440234 686 ntTSL 2 BASIC22.77■■□□□ 1.24
CALR3Q96L12 OR2I1P-207ENST00000453522 948 ntBASIC22.77■■□□□ 1.24
CALR3Q96L12 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC22.77■■□□□ 1.24
CALR3Q96L12 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
CALR3Q96L12 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
CALR3Q96L12 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC22.77■■□□□ 1.24
CALR3Q96L12 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC22.77■■□□□ 1.23
CALR3Q96L12 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
CALR3Q96L12 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC22.76■■□□□ 1.23
CALR3Q96L12 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
CALR3Q96L12 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC22.76■■□□□ 1.23
CALR3Q96L12 AL356740.2-201ENST00000601559 647 ntBASIC22.76■■□□□ 1.23
CALR3Q96L12 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC22.76■■□□□ 1.23
CALR3Q96L12 GATM-206ENST00000558336 1522 ntTSL 2 BASIC22.76■■□□□ 1.23
CALR3Q96L12 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
CALR3Q96L12 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC22.76■■□□□ 1.23
CALR3Q96L12 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC22.76■■□□□ 1.23
CALR3Q96L12 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC22.75■■□□□ 1.23
CALR3Q96L12 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
CALR3Q96L12 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
CALR3Q96L12 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC22.75■■□□□ 1.23
CALR3Q96L12 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms