Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC21.68■■□□□ 1.06
CHMP6Q96FZ7 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
CHMP6Q96FZ7 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CHMP6Q96FZ7 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CHMP6Q96FZ7 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CHMP6Q96FZ7 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CHMP6Q96FZ7 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.68■■□□□ 1.06
CHMP6Q96FZ7 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
CHMP6Q96FZ7 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
CHMP6Q96FZ7 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CHMP6Q96FZ7 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CHMP6Q96FZ7 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CHMP6Q96FZ7 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CHMP6Q96FZ7 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.68■■□□□ 1.06
CHMP6Q96FZ7 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CHMP6Q96FZ7 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CHMP6Q96FZ7 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CHMP6Q96FZ7 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CHMP6Q96FZ7 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CHMP6Q96FZ7 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CHMP6Q96FZ7 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC21.67■■□□□ 1.06
CHMP6Q96FZ7 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.67■■□□□ 1.06
CHMP6Q96FZ7 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CHMP6Q96FZ7 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC21.67■■□□□ 1.06
CHMP6Q96FZ7 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CHMP6Q96FZ7 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CHMP6Q96FZ7 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CHMP6Q96FZ7 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CHMP6Q96FZ7 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CHMP6Q96FZ7 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.67■■□□□ 1.06
CHMP6Q96FZ7 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CHMP6Q96FZ7 AC012354.3-201ENST00000623734 483 ntBASIC21.67■■□□□ 1.06
CHMP6Q96FZ7 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
CHMP6Q96FZ7 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CHMP6Q96FZ7 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.66■■□□□ 1.06
CHMP6Q96FZ7 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
CHMP6Q96FZ7 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21.66■■□□□ 1.06
CHMP6Q96FZ7 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CHMP6Q96FZ7 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CHMP6Q96FZ7 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
CHMP6Q96FZ7 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC21.66■■□□□ 1.06
CHMP6Q96FZ7 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CHMP6Q96FZ7 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CHMP6Q96FZ7 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CHMP6Q96FZ7 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CHMP6Q96FZ7 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CHMP6Q96FZ7 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CHMP6Q96FZ7 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CHMP6Q96FZ7 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CHMP6Q96FZ7 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC21.65■■□□□ 1.06
CHMP6Q96FZ7 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CHMP6Q96FZ7 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CHMP6Q96FZ7 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CHMP6Q96FZ7 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
CHMP6Q96FZ7 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CHMP6Q96FZ7 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
CHMP6Q96FZ7 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
CHMP6Q96FZ7 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CHMP6Q96FZ7 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CHMP6Q96FZ7 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CHMP6Q96FZ7 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.64■■□□□ 1.05
CHMP6Q96FZ7 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CHMP6Q96FZ7 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
CHMP6Q96FZ7 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CHMP6Q96FZ7 AL033527.3-201ENST00000566366 1196 ntBASIC21.64■■□□□ 1.05
CHMP6Q96FZ7 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CHMP6Q96FZ7 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
CHMP6Q96FZ7 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.64■■□□□ 1.05
CHMP6Q96FZ7 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CHMP6Q96FZ7 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CHMP6Q96FZ7 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CHMP6Q96FZ7 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
CHMP6Q96FZ7 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CHMP6Q96FZ7 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CHMP6Q96FZ7 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CHMP6Q96FZ7 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CHMP6Q96FZ7 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
CHMP6Q96FZ7 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC21.63■■□□□ 1.05
CHMP6Q96FZ7 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CHMP6Q96FZ7 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC21.63■■□□□ 1.05
CHMP6Q96FZ7 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC21.63■■□□□ 1.05
CHMP6Q96FZ7 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CHMP6Q96FZ7 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC21.63■■□□□ 1.05
CHMP6Q96FZ7 MTX2-204ENST00000443241 799 ntTSL 3 BASIC21.63■■□□□ 1.05
CHMP6Q96FZ7 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC21.63■■□□□ 1.05
CHMP6Q96FZ7 AC010980.1-201ENST00000587192 1142 ntBASIC21.63■■□□□ 1.05
CHMP6Q96FZ7 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
CHMP6Q96FZ7 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CHMP6Q96FZ7 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CHMP6Q96FZ7 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CHMP6Q96FZ7 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC21.63■■□□□ 1.05
CHMP6Q96FZ7 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
CHMP6Q96FZ7 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CHMP6Q96FZ7 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CHMP6Q96FZ7 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.62■■□□□ 1.05
CHMP6Q96FZ7 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
CHMP6Q96FZ7 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CHMP6Q96FZ7 GUK1-208ENST00000366728 842 ntTSL 2 BASIC21.62■■□□□ 1.05
CHMP6Q96FZ7 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC21.62■■□□□ 1.05
CHMP6Q96FZ7 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms