Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
FOXRED1Q96CU9 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
FOXRED1Q96CU9 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
FOXRED1Q96CU9 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
FOXRED1Q96CU9 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
FOXRED1Q96CU9 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC18.73■□□□□ 0.59
FOXRED1Q96CU9 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
FOXRED1Q96CU9 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
FOXRED1Q96CU9 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
FOXRED1Q96CU9 MTDHP2-201ENST00000601468 714 ntBASIC18.73■□□□□ 0.59
FOXRED1Q96CU9 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
FOXRED1Q96CU9 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
FOXRED1Q96CU9 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
FOXRED1Q96CU9 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
FOXRED1Q96CU9 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
FOXRED1Q96CU9 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
FOXRED1Q96CU9 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
FOXRED1Q96CU9 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
FOXRED1Q96CU9 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
FOXRED1Q96CU9 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC18.72■□□□□ 0.59
FOXRED1Q96CU9 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC18.72■□□□□ 0.59
FOXRED1Q96CU9 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
FOXRED1Q96CU9 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC18.72■□□□□ 0.59
FOXRED1Q96CU9 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
FOXRED1Q96CU9 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
FOXRED1Q96CU9 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
FOXRED1Q96CU9 TSPY9P-201ENST00000440215 945 ntBASIC18.72■□□□□ 0.59
FOXRED1Q96CU9 TSPY11P-201ENST00000442607 1045 ntBASIC18.72■□□□□ 0.59
FOXRED1Q96CU9 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC18.72■□□□□ 0.59
FOXRED1Q96CU9 NKILA-201ENST00000613231 537 ntTSL 4 BASIC18.72■□□□□ 0.59
FOXRED1Q96CU9 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC18.72■□□□□ 0.59
FOXRED1Q96CU9 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
FOXRED1Q96CU9 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
FOXRED1Q96CU9 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.72■□□□□ 0.59
FOXRED1Q96CU9 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
FOXRED1Q96CU9 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
FOXRED1Q96CU9 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
FOXRED1Q96CU9 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
FOXRED1Q96CU9 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC18.71■□□□□ 0.59
FOXRED1Q96CU9 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.71■□□□□ 0.59
FOXRED1Q96CU9 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
FOXRED1Q96CU9 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
FOXRED1Q96CU9 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
FOXRED1Q96CU9 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
FOXRED1Q96CU9 KRT16P3-201ENST00000439127 1283 ntBASIC18.71■□□□□ 0.59
FOXRED1Q96CU9 CLTA-206ENST00000466396 695 ntTSL 2 BASIC18.71■□□□□ 0.59
FOXRED1Q96CU9 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC18.71■□□□□ 0.59
FOXRED1Q96CU9 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
FOXRED1Q96CU9 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC18.71■□□□□ 0.59
FOXRED1Q96CU9 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
FOXRED1Q96CU9 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
FOXRED1Q96CU9 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.71■□□□□ 0.59
FOXRED1Q96CU9 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
FOXRED1Q96CU9 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
FOXRED1Q96CU9 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.71■□□□□ 0.59
FOXRED1Q96CU9 AC009102.2-201ENST00000606772 1639 ntBASIC18.71■□□□□ 0.58
FOXRED1Q96CU9 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
FOXRED1Q96CU9 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
FOXRED1Q96CU9 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
FOXRED1Q96CU9 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
FOXRED1Q96CU9 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
FOXRED1Q96CU9 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
FOXRED1Q96CU9 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.7■□□□□ 0.58
FOXRED1Q96CU9 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
FOXRED1Q96CU9 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
FOXRED1Q96CU9 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
FOXRED1Q96CU9 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
FOXRED1Q96CU9 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
FOXRED1Q96CU9 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
FOXRED1Q96CU9 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
FOXRED1Q96CU9 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC18.7■□□□□ 0.58
FOXRED1Q96CU9 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
FOXRED1Q96CU9 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
FOXRED1Q96CU9 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
FOXRED1Q96CU9 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC18.69■□□□□ 0.58
FOXRED1Q96CU9 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
FOXRED1Q96CU9 AL356441.2-201ENST00000443009 864 ntBASIC18.69■□□□□ 0.58
FOXRED1Q96CU9 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC18.69■□□□□ 0.58
FOXRED1Q96CU9 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
FOXRED1Q96CU9 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
FOXRED1Q96CU9 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
FOXRED1Q96CU9 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
FOXRED1Q96CU9 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
FOXRED1Q96CU9 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
FOXRED1Q96CU9 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
FOXRED1Q96CU9 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
FOXRED1Q96CU9 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
FOXRED1Q96CU9 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FOXRED1Q96CU9 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FOXRED1Q96CU9 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FOXRED1Q96CU9 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FOXRED1Q96CU9 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
FOXRED1Q96CU9 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC18.68■□□□□ 0.58
FOXRED1Q96CU9 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC18.68■□□□□ 0.58
FOXRED1Q96CU9 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FOXRED1Q96CU9 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FOXRED1Q96CU9 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
FOXRED1Q96CU9 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FOXRED1Q96CU9 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FOXRED1Q96CU9 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms