Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC24.65■■□□□ 1.54
USP6NLQ92738 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
USP6NLQ92738 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC24.65■■□□□ 1.54
USP6NLQ92738 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC24.65■■□□□ 1.54
USP6NLQ92738 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
USP6NLQ92738 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
USP6NLQ92738 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
USP6NLQ92738 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC24.64■■□□□ 1.54
USP6NLQ92738 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
USP6NLQ92738 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC24.64■■□□□ 1.54
USP6NLQ92738 APTR-203ENST00000430801 583 ntTSL 5 BASIC24.64■■□□□ 1.54
USP6NLQ92738 SERP1-208ENST00000491660 830 ntTSL 2 BASIC24.64■■□□□ 1.54
USP6NLQ92738 AF201337.1-201ENST00000520239 748 ntBASIC24.64■■□□□ 1.54
USP6NLQ92738 AC133041.1-202ENST00000642053 222 ntBASIC24.64■■□□□ 1.54
USP6NLQ92738 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
USP6NLQ92738 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC24.64■■□□□ 1.53
USP6NLQ92738 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC24.64■■□□□ 1.53
USP6NLQ92738 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
USP6NLQ92738 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
USP6NLQ92738 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC24.63■■□□□ 1.53
USP6NLQ92738 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC24.63■■□□□ 1.53
USP6NLQ92738 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
USP6NLQ92738 AC098934.4-201ENST00000564127 592 ntBASIC24.63■■□□□ 1.53
USP6NLQ92738 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC24.63■■□□□ 1.53
USP6NLQ92738 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
USP6NLQ92738 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC24.62■■□□□ 1.53
USP6NLQ92738 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
USP6NLQ92738 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC24.62■■□□□ 1.53
USP6NLQ92738 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC24.62■■□□□ 1.53
USP6NLQ92738 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC24.62■■□□□ 1.53
USP6NLQ92738 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
USP6NLQ92738 LINC01124-201ENST00000409786 2117 ntBASIC24.62■■□□□ 1.53
USP6NLQ92738 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
USP6NLQ92738 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
USP6NLQ92738 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
USP6NLQ92738 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC24.61■■□□□ 1.53
USP6NLQ92738 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC24.61■■□□□ 1.53
USP6NLQ92738 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC24.61■■□□□ 1.53
USP6NLQ92738 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
USP6NLQ92738 PKM-204ENST00000449901 2526 ntTSL 2 BASIC24.61■■□□□ 1.53
USP6NLQ92738 DUSP8P5-201ENST00000422884 1815 ntBASIC24.61■■□□□ 1.53
USP6NLQ92738 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
USP6NLQ92738 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
USP6NLQ92738 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC24.6■■□□□ 1.53
USP6NLQ92738 AC010141.2-201ENST00000452426 721 ntBASIC24.6■■□□□ 1.53
USP6NLQ92738 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC24.6■■□□□ 1.53
USP6NLQ92738 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC24.6■■□□□ 1.53
USP6NLQ92738 AC105036.2-201ENST00000569468 176 ntBASIC24.6■■□□□ 1.53
USP6NLQ92738 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
USP6NLQ92738 AC010536.3-201ENST00000620306 533 ntBASIC24.6■■□□□ 1.53
USP6NLQ92738 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
USP6NLQ92738 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC24.6■■□□□ 1.53
USP6NLQ92738 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
USP6NLQ92738 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
USP6NLQ92738 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
USP6NLQ92738 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC24.59■■□□□ 1.53
USP6NLQ92738 UQCRFS1P1-201ENST00000435169 820 ntBASIC24.59■■□□□ 1.53
USP6NLQ92738 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
USP6NLQ92738 KRT18P20-201ENST00000548986 1279 ntBASIC24.59■■□□□ 1.53
USP6NLQ92738 AC138907.5-202ENST00000569484 235 ntBASIC24.59■■□□□ 1.53
USP6NLQ92738 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC24.59■■□□□ 1.53
USP6NLQ92738 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC24.58■■□□□ 1.53
USP6NLQ92738 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
USP6NLQ92738 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC24.58■■□□□ 1.53
USP6NLQ92738 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
USP6NLQ92738 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC24.58■■□□□ 1.53
USP6NLQ92738 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC24.58■■□□□ 1.53
USP6NLQ92738 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
USP6NLQ92738 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
USP6NLQ92738 TBCB-214ENST00000629269 413 ntTSL 5 BASIC24.58■■□□□ 1.53
USP6NLQ92738 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC24.58■■□□□ 1.52
USP6NLQ92738 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.52
USP6NLQ92738 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC24.57■■□□□ 1.52
USP6NLQ92738 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
USP6NLQ92738 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC24.57■■□□□ 1.52
USP6NLQ92738 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
USP6NLQ92738 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC24.57■■□□□ 1.52
USP6NLQ92738 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC24.57■■□□□ 1.52
USP6NLQ92738 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC24.57■■□□□ 1.52
USP6NLQ92738 FAM201B-201ENST00000458407 597 ntBASIC24.57■■□□□ 1.52
USP6NLQ92738 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC24.57■■□□□ 1.52
USP6NLQ92738 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
USP6NLQ92738 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
USP6NLQ92738 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC24.57■■□□□ 1.52
USP6NLQ92738 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
USP6NLQ92738 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
USP6NLQ92738 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC24.56■■□□□ 1.52
USP6NLQ92738 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
USP6NLQ92738 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC24.56■■□□□ 1.52
USP6NLQ92738 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
USP6NLQ92738 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
USP6NLQ92738 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC24.56■■□□□ 1.52
USP6NLQ92738 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
USP6NLQ92738 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC24.56■■□□□ 1.52
USP6NLQ92738 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC24.56■■□□□ 1.52
USP6NLQ92738 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
USP6NLQ92738 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC24.55■■□□□ 1.52
USP6NLQ92738 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC24.55■■□□□ 1.52
USP6NLQ92738 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC24.55■■□□□ 1.52
USP6NLQ92738 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC24.55■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms