Protein–RNA interactions for Protein: Q92616

GCN1, eIF-2-alpha kinase activator GCN1, humanhuman

Known RBP Predictions only

Length 2,671 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1Q92616 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC19.3■□□□□ 0.68
GCN1Q92616 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
GCN1Q92616 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
GCN1Q92616 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
GCN1Q92616 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC19.3■□□□□ 0.68
GCN1Q92616 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
GCN1Q92616 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
GCN1Q92616 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
GCN1Q92616 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
GCN1Q92616 LSR-205ENST00000427250 1606 ntTSL 2 BASIC19.3■□□□□ 0.68
GCN1Q92616 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
GCN1Q92616 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
GCN1Q92616 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.3■□□□□ 0.68
GCN1Q92616 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.3■□□□□ 0.68
GCN1Q92616 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.3■□□□□ 0.68
GCN1Q92616 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
GCN1Q92616 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
GCN1Q92616 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
GCN1Q92616 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
GCN1Q92616 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.29■□□□□ 0.68
GCN1Q92616 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
GCN1Q92616 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
GCN1Q92616 AL353708.3-201ENST00000610272 989 ntBASIC19.29■□□□□ 0.68
GCN1Q92616 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.29■□□□□ 0.68
GCN1Q92616 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
GCN1Q92616 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
GCN1Q92616 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.29■□□□□ 0.68
GCN1Q92616 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.29■□□□□ 0.68
GCN1Q92616 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.29■□□□□ 0.68
GCN1Q92616 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
GCN1Q92616 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
GCN1Q92616 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
GCN1Q92616 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
GCN1Q92616 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
GCN1Q92616 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
GCN1Q92616 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.28■□□□□ 0.68
GCN1Q92616 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.28■□□□□ 0.68
GCN1Q92616 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.28■□□□□ 0.68
GCN1Q92616 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.28■□□□□ 0.68
GCN1Q92616 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.28■□□□□ 0.68
GCN1Q92616 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
GCN1Q92616 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
GCN1Q92616 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
GCN1Q92616 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
GCN1Q92616 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC19.28■□□□□ 0.68
GCN1Q92616 MIR4785-201ENST00000585005 73 ntBASIC19.28■□□□□ 0.68
GCN1Q92616 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
GCN1Q92616 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
GCN1Q92616 KRT126P-201ENST00000549467 1181 ntBASIC19.28■□□□□ 0.68
GCN1Q92616 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC19.27■□□□□ 0.68
GCN1Q92616 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
GCN1Q92616 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
GCN1Q92616 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
GCN1Q92616 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
GCN1Q92616 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
GCN1Q92616 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
GCN1Q92616 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
GCN1Q92616 AC026396.1-201ENST00000419388 421 ntBASIC19.27■□□□□ 0.67
GCN1Q92616 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.27■□□□□ 0.67
GCN1Q92616 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
GCN1Q92616 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.26■□□□□ 0.67
GCN1Q92616 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GCN1Q92616 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
GCN1Q92616 NTF6B-201ENST00000591913 560 ntBASIC19.26■□□□□ 0.67
GCN1Q92616 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.26■□□□□ 0.67
GCN1Q92616 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
GCN1Q92616 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GCN1Q92616 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.26■□□□□ 0.67
GCN1Q92616 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GCN1Q92616 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GCN1Q92616 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
GCN1Q92616 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.26■□□□□ 0.67
GCN1Q92616 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
GCN1Q92616 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.26■□□□□ 0.67
GCN1Q92616 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.26■□□□□ 0.67
GCN1Q92616 AP001412.1-201ENST00000608405 714 ntBASIC19.26■□□□□ 0.67
GCN1Q92616 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.25■□□□□ 0.67
GCN1Q92616 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
GCN1Q92616 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
GCN1Q92616 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC19.25■□□□□ 0.67
GCN1Q92616 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.25■□□□□ 0.67
GCN1Q92616 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
GCN1Q92616 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
GCN1Q92616 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
GCN1Q92616 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
GCN1Q92616 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.25■□□□□ 0.67
GCN1Q92616 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC19.25■□□□□ 0.67
GCN1Q92616 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
GCN1Q92616 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GCN1Q92616 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GCN1Q92616 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
GCN1Q92616 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
GCN1Q92616 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.24■□□□□ 0.67
GCN1Q92616 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
GCN1Q92616 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC19.24■□□□□ 0.67
GCN1Q92616 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.24■□□□□ 0.67
GCN1Q92616 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
GCN1Q92616 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.24■□□□□ 0.67
GCN1Q92616 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
GCN1Q92616 GPALPP1-207ENST00000611650 899 ntBASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms