Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
AP3S1Q92572 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
AP3S1Q92572 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
AP3S1Q92572 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.01■□□□□ 0.63
AP3S1Q92572 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.01■□□□□ 0.63
AP3S1Q92572 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
AP3S1Q92572 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
AP3S1Q92572 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
AP3S1Q92572 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC19.01■□□□□ 0.63
AP3S1Q92572 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
AP3S1Q92572 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
AP3S1Q92572 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
AP3S1Q92572 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
AP3S1Q92572 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
AP3S1Q92572 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19■□□□□ 0.63
AP3S1Q92572 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
AP3S1Q92572 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19■□□□□ 0.63
AP3S1Q92572 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19■□□□□ 0.63
AP3S1Q92572 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19■□□□□ 0.63
AP3S1Q92572 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19■□□□□ 0.63
AP3S1Q92572 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC19■□□□□ 0.63
AP3S1Q92572 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC19■□□□□ 0.63
AP3S1Q92572 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC19■□□□□ 0.63
AP3S1Q92572 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
AP3S1Q92572 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19■□□□□ 0.63
AP3S1Q92572 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19■□□□□ 0.63
AP3S1Q92572 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
AP3S1Q92572 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
AP3S1Q92572 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
AP3S1Q92572 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
AP3S1Q92572 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
AP3S1Q92572 LINC01006-201ENST00000333319 2292 ntBASIC18.99■□□□□ 0.63
AP3S1Q92572 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC18.99■□□□□ 0.63
AP3S1Q92572 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
AP3S1Q92572 HES4-202ENST00000428771 1040 ntTSL 2 BASIC18.99■□□□□ 0.63
AP3S1Q92572 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
AP3S1Q92572 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
AP3S1Q92572 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
AP3S1Q92572 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
AP3S1Q92572 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.99■□□□□ 0.63
AP3S1Q92572 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
AP3S1Q92572 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
AP3S1Q92572 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
AP3S1Q92572 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
AP3S1Q92572 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
AP3S1Q92572 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
AP3S1Q92572 AC007952.6-201ENST00000573168 2673 ntBASIC18.98■□□□□ 0.63
AP3S1Q92572 AC003957.1-201ENST00000625108 2673 ntBASIC18.98■□□□□ 0.63
AP3S1Q92572 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
AP3S1Q92572 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC18.98■□□□□ 0.63
AP3S1Q92572 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC18.98■□□□□ 0.63
AP3S1Q92572 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
AP3S1Q92572 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
AP3S1Q92572 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.98■□□□□ 0.63
AP3S1Q92572 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
AP3S1Q92572 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
AP3S1Q92572 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
AP3S1Q92572 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
AP3S1Q92572 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
AP3S1Q92572 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
AP3S1Q92572 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
AP3S1Q92572 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
AP3S1Q92572 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
AP3S1Q92572 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
AP3S1Q92572 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
AP3S1Q92572 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
AP3S1Q92572 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
AP3S1Q92572 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
AP3S1Q92572 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC18.97■□□□□ 0.63
AP3S1Q92572 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC18.97■□□□□ 0.63
AP3S1Q92572 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
AP3S1Q92572 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
AP3S1Q92572 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.97■□□□□ 0.63
AP3S1Q92572 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
AP3S1Q92572 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
AP3S1Q92572 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
AP3S1Q92572 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
AP3S1Q92572 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
AP3S1Q92572 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC18.97■□□□□ 0.63
AP3S1Q92572 AC133552.2-201ENST00000619106 1032 ntBASIC18.97■□□□□ 0.63
AP3S1Q92572 GAK-223ENST00000628912 497 ntTSL 5 BASIC18.97■□□□□ 0.63
AP3S1Q92572 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.97■□□□□ 0.63
AP3S1Q92572 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
AP3S1Q92572 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC18.97■□□□□ 0.63
AP3S1Q92572 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.97■□□□□ 0.63
AP3S1Q92572 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
AP3S1Q92572 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC18.97■□□□□ 0.63
AP3S1Q92572 AC009831.1-201ENST00000580420 1582 ntBASIC18.97■□□□□ 0.63
AP3S1Q92572 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC18.97■□□□□ 0.63
AP3S1Q92572 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
AP3S1Q92572 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.97■□□□□ 0.63
AP3S1Q92572 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.97■□□□□ 0.63
AP3S1Q92572 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
AP3S1Q92572 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC18.97■□□□□ 0.63
AP3S1Q92572 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
AP3S1Q92572 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
AP3S1Q92572 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC18.96■□□□□ 0.63
AP3S1Q92572 RNF165-205ENST00000588679 2904 ntBASIC18.96■□□□□ 0.63
AP3S1Q92572 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
AP3S1Q92572 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms