Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
DDX1Q92499 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
DDX1Q92499 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
DDX1Q92499 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC23.12■■□□□ 1.29
DDX1Q92499 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC23.12■■□□□ 1.29
DDX1Q92499 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
DDX1Q92499 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
DDX1Q92499 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
DDX1Q92499 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
DDX1Q92499 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC23.11■■□□□ 1.29
DDX1Q92499 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
DDX1Q92499 WWC2-AS2-201ENST00000578387 2183 ntBASIC23.11■■□□□ 1.29
DDX1Q92499 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
DDX1Q92499 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
DDX1Q92499 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
DDX1Q92499 PTMA-205ENST00000410064 814 ntTSL 2 BASIC23.11■■□□□ 1.29
DDX1Q92499 AC091305.1-201ENST00000479476 895 ntBASIC23.11■■□□□ 1.29
DDX1Q92499 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
DDX1Q92499 AC087623.3-201ENST00000607047 1098 ntBASIC23.11■■□□□ 1.29
DDX1Q92499 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
DDX1Q92499 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
DDX1Q92499 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
DDX1Q92499 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC23.1■■□□□ 1.29
DDX1Q92499 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
DDX1Q92499 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
DDX1Q92499 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
DDX1Q92499 AC090192.1-201ENST00000517740 490 ntBASIC23.1■■□□□ 1.29
DDX1Q92499 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC23.1■■□□□ 1.29
DDX1Q92499 AF213884.3-201ENST00000563833 479 ntBASIC23.1■■□□□ 1.29
DDX1Q92499 GRAMD4P4-201ENST00000613563 1115 ntBASIC23.1■■□□□ 1.29
DDX1Q92499 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC23.1■■□□□ 1.29
DDX1Q92499 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
DDX1Q92499 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
DDX1Q92499 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
DDX1Q92499 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC23.09■■□□□ 1.29
DDX1Q92499 MIR4767-201ENST00000582827 78 ntBASIC23.09■■□□□ 1.29
DDX1Q92499 RARRES2P11-201ENST00000635158 484 ntBASIC23.09■■□□□ 1.29
DDX1Q92499 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
DDX1Q92499 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC23.09■■□□□ 1.29
DDX1Q92499 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
DDX1Q92499 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
DDX1Q92499 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
DDX1Q92499 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
DDX1Q92499 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
DDX1Q92499 MIR939-201ENST00000401314 82 ntBASIC23.08■■□□□ 1.29
DDX1Q92499 AC010141.3-201ENST00000456659 717 ntBASIC23.08■■□□□ 1.29
DDX1Q92499 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC23.08■■□□□ 1.29
DDX1Q92499 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC23.08■■□□□ 1.29
DDX1Q92499 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
DDX1Q92499 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
DDX1Q92499 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC23.08■■□□□ 1.28
DDX1Q92499 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
DDX1Q92499 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
DDX1Q92499 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
DDX1Q92499 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
DDX1Q92499 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC23.07■■□□□ 1.28
DDX1Q92499 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC23.07■■□□□ 1.28
DDX1Q92499 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
DDX1Q92499 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
DDX1Q92499 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
DDX1Q92499 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
DDX1Q92499 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
DDX1Q92499 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
DDX1Q92499 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
DDX1Q92499 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
DDX1Q92499 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
DDX1Q92499 AP005435.1-201ENST00000529293 1178 ntBASIC23.06■■□□□ 1.28
DDX1Q92499 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
DDX1Q92499 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC23.05■■□□□ 1.28
DDX1Q92499 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
DDX1Q92499 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
DDX1Q92499 OXCT2P1-201ENST00000447263 1535 ntBASIC23.05■■□□□ 1.28
DDX1Q92499 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
DDX1Q92499 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
DDX1Q92499 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC23.05■■□□□ 1.28
DDX1Q92499 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
DDX1Q92499 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
DDX1Q92499 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
DDX1Q92499 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC23.05■■□□□ 1.28
DDX1Q92499 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
DDX1Q92499 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC23.04■■□□□ 1.28
DDX1Q92499 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
DDX1Q92499 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
DDX1Q92499 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
DDX1Q92499 AC010542.4-201ENST00000563151 1910 ntBASIC23.04■■□□□ 1.28
DDX1Q92499 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
DDX1Q92499 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC23.03■■□□□ 1.28
DDX1Q92499 FAM99A-202ENST00000538190 1989 ntBASIC23.03■■□□□ 1.28
DDX1Q92499 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
DDX1Q92499 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
DDX1Q92499 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC23.03■■□□□ 1.28
DDX1Q92499 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC23.03■■□□□ 1.28
DDX1Q92499 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
DDX1Q92499 BX842568.3-201ENST00000418104 571 ntBASIC23.03■■□□□ 1.28
DDX1Q92499 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
DDX1Q92499 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC23.03■■□□□ 1.28
DDX1Q92499 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC23.03■■□□□ 1.28
DDX1Q92499 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
DDX1Q92499 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
DDX1Q92499 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms