Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
RAB3IL1Q8TBN0 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RAB3IL1Q8TBN0 AC138932.1-201ENST00000534164 6830 ntBASIC21.46■■□□□ 1.03
RAB3IL1Q8TBN0 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RAB3IL1Q8TBN0 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC21.46■■□□□ 1.03
RAB3IL1Q8TBN0 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
RAB3IL1Q8TBN0 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
RAB3IL1Q8TBN0 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RAB3IL1Q8TBN0 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC21.46■■□□□ 1.03
RAB3IL1Q8TBN0 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
RAB3IL1Q8TBN0 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.46■■□□□ 1.03
RAB3IL1Q8TBN0 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
RAB3IL1Q8TBN0 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RAB3IL1Q8TBN0 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RAB3IL1Q8TBN0 AC005703.6-201ENST00000623265 1329 ntBASIC21.46■■□□□ 1.03
RAB3IL1Q8TBN0 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RAB3IL1Q8TBN0 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RAB3IL1Q8TBN0 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RAB3IL1Q8TBN0 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.46■■□□□ 1.03
RAB3IL1Q8TBN0 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RAB3IL1Q8TBN0 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
RAB3IL1Q8TBN0 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.45■■□□□ 1.02
RAB3IL1Q8TBN0 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.45■■□□□ 1.02
RAB3IL1Q8TBN0 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RAB3IL1Q8TBN0 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RAB3IL1Q8TBN0 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.45■■□□□ 1.02
RAB3IL1Q8TBN0 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.45■■□□□ 1.02
RAB3IL1Q8TBN0 PVT1_1.1-201ENST00000615125 194 ntBASIC21.45■■□□□ 1.02
RAB3IL1Q8TBN0 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
RAB3IL1Q8TBN0 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
RAB3IL1Q8TBN0 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
RAB3IL1Q8TBN0 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.44■■□□□ 1.02
RAB3IL1Q8TBN0 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.44■■□□□ 1.02
RAB3IL1Q8TBN0 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RAB3IL1Q8TBN0 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.44■■□□□ 1.02
RAB3IL1Q8TBN0 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
RAB3IL1Q8TBN0 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RAB3IL1Q8TBN0 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RAB3IL1Q8TBN0 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.44■■□□□ 1.02
RAB3IL1Q8TBN0 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RAB3IL1Q8TBN0 Z98882.1-201ENST00000622160 2253 ntBASIC21.44■■□□□ 1.02
RAB3IL1Q8TBN0 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
RAB3IL1Q8TBN0 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RAB3IL1Q8TBN0 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RAB3IL1Q8TBN0 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
RAB3IL1Q8TBN0 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
RAB3IL1Q8TBN0 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC21.43■■□□□ 1.02
RAB3IL1Q8TBN0 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RAB3IL1Q8TBN0 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
RAB3IL1Q8TBN0 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
RAB3IL1Q8TBN0 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.43■■□□□ 1.02
RAB3IL1Q8TBN0 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC21.43■■□□□ 1.02
RAB3IL1Q8TBN0 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC21.43■■□□□ 1.02
RAB3IL1Q8TBN0 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.43■■□□□ 1.02
RAB3IL1Q8TBN0 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RAB3IL1Q8TBN0 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.43■■□□□ 1.02
RAB3IL1Q8TBN0 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
RAB3IL1Q8TBN0 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.43■■□□□ 1.02
RAB3IL1Q8TBN0 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RAB3IL1Q8TBN0 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RAB3IL1Q8TBN0 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RAB3IL1Q8TBN0 GUK1-208ENST00000366728 842 ntTSL 2 BASIC21.42■■□□□ 1.02
RAB3IL1Q8TBN0 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RAB3IL1Q8TBN0 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.42■■□□□ 1.02
RAB3IL1Q8TBN0 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.42■■□□□ 1.02
RAB3IL1Q8TBN0 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.42■■□□□ 1.02
RAB3IL1Q8TBN0 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RAB3IL1Q8TBN0 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC21.42■■□□□ 1.02
RAB3IL1Q8TBN0 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.42■■□□□ 1.02
RAB3IL1Q8TBN0 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.42■■□□□ 1.02
RAB3IL1Q8TBN0 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
RAB3IL1Q8TBN0 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.42■■□□□ 1.02
RAB3IL1Q8TBN0 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
RAB3IL1Q8TBN0 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.41■■□□□ 1.02
RAB3IL1Q8TBN0 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RAB3IL1Q8TBN0 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RAB3IL1Q8TBN0 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
RAB3IL1Q8TBN0 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RAB3IL1Q8TBN0 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RAB3IL1Q8TBN0 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RAB3IL1Q8TBN0 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
RAB3IL1Q8TBN0 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC21.41■■□□□ 1.02
RAB3IL1Q8TBN0 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RAB3IL1Q8TBN0 MIR6722-201ENST00000617286 78 ntBASIC21.41■■□□□ 1.02
RAB3IL1Q8TBN0 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RAB3IL1Q8TBN0 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
RAB3IL1Q8TBN0 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
RAB3IL1Q8TBN0 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
RAB3IL1Q8TBN0 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
RAB3IL1Q8TBN0 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
RAB3IL1Q8TBN0 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.4■■□□□ 1.02
RAB3IL1Q8TBN0 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RAB3IL1Q8TBN0 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RAB3IL1Q8TBN0 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.4■■□□□ 1.02
RAB3IL1Q8TBN0 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.4■■□□□ 1.02
RAB3IL1Q8TBN0 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
RAB3IL1Q8TBN0 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RAB3IL1Q8TBN0 BEX3-202ENST00000372634 753 ntTSL 2 BASIC21.4■■□□□ 1.02
RAB3IL1Q8TBN0 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RAB3IL1Q8TBN0 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms