Protein–RNA interactions for Protein: Q8NCR6

SMRP1, Spermatid-specific manchette-related protein 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMRP1Q8NCR6 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SMRP1Q8NCR6 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC22.58■■□□□ 1.21
SMRP1Q8NCR6 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC22.58■■□□□ 1.21
SMRP1Q8NCR6 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC22.58■■□□□ 1.21
SMRP1Q8NCR6 PHB2-213ENST00000546111 858 ntTSL 2 BASIC22.58■■□□□ 1.21
SMRP1Q8NCR6 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
SMRP1Q8NCR6 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC22.58■■□□□ 1.21
SMRP1Q8NCR6 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
SMRP1Q8NCR6 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SMRP1Q8NCR6 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC22.57■■□□□ 1.2
SMRP1Q8NCR6 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SMRP1Q8NCR6 RHEB-204ENST00000472642 900 ntTSL 3 BASIC22.57■■□□□ 1.2
SMRP1Q8NCR6 TERF1P5-201ENST00000477545 1207 ntBASIC22.57■■□□□ 1.2
SMRP1Q8NCR6 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC22.57■■□□□ 1.2
SMRP1Q8NCR6 IRX5-204ENST00000560154 879 ntTSL 5 BASIC22.57■■□□□ 1.2
SMRP1Q8NCR6 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SMRP1Q8NCR6 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SMRP1Q8NCR6 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
SMRP1Q8NCR6 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SMRP1Q8NCR6 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SMRP1Q8NCR6 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
SMRP1Q8NCR6 BMP1-204ENST00000397814 836 ntTSL 4 BASIC22.56■■□□□ 1.2
SMRP1Q8NCR6 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC22.56■■□□□ 1.2
SMRP1Q8NCR6 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SMRP1Q8NCR6 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC22.56■■□□□ 1.2
SMRP1Q8NCR6 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
SMRP1Q8NCR6 AC007322.4-201ENST00000509611 723 ntBASIC22.56■■□□□ 1.2
SMRP1Q8NCR6 ADM-205ENST00000528544 586 ntTSL 2 BASIC22.56■■□□□ 1.2
SMRP1Q8NCR6 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC22.56■■□□□ 1.2
SMRP1Q8NCR6 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC22.56■■□□□ 1.2
SMRP1Q8NCR6 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC22.56■■□□□ 1.2
SMRP1Q8NCR6 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC22.56■■□□□ 1.2
SMRP1Q8NCR6 OR10C1-204ENST00000622521 1039 ntBASIC22.56■■□□□ 1.2
SMRP1Q8NCR6 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC22.56■■□□□ 1.2
SMRP1Q8NCR6 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SMRP1Q8NCR6 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
SMRP1Q8NCR6 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
SMRP1Q8NCR6 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
SMRP1Q8NCR6 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
SMRP1Q8NCR6 AC138932.3-201ENST00000567634 1902 ntBASIC22.55■■□□□ 1.2
SMRP1Q8NCR6 DUSP8P5-201ENST00000422884 1815 ntBASIC22.55■■□□□ 1.2
SMRP1Q8NCR6 EED-207ENST00000528180 1745 ntTSL 5 BASIC22.55■■□□□ 1.2
SMRP1Q8NCR6 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
SMRP1Q8NCR6 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC22.55■■□□□ 1.2
SMRP1Q8NCR6 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
SMRP1Q8NCR6 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC22.55■■□□□ 1.2
SMRP1Q8NCR6 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC22.54■■□□□ 1.2
SMRP1Q8NCR6 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SMRP1Q8NCR6 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
SMRP1Q8NCR6 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
SMRP1Q8NCR6 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC22.54■■□□□ 1.2
SMRP1Q8NCR6 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SMRP1Q8NCR6 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC22.54■■□□□ 1.2
SMRP1Q8NCR6 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC22.54■■□□□ 1.2
SMRP1Q8NCR6 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC22.54■■□□□ 1.2
SMRP1Q8NCR6 AC083880.1-201ENST00000608266 535 ntBASIC22.54■■□□□ 1.2
SMRP1Q8NCR6 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
SMRP1Q8NCR6 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC22.54■■□□□ 1.2
SMRP1Q8NCR6 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
SMRP1Q8NCR6 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
SMRP1Q8NCR6 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC22.54■■□□□ 1.2
SMRP1Q8NCR6 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC22.54■■□□□ 1.2
SMRP1Q8NCR6 LINC00543-201ENST00000567234 1845 ntBASIC22.53■■□□□ 1.2
SMRP1Q8NCR6 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC22.53■■□□□ 1.2
SMRP1Q8NCR6 ESRRAP1-201ENST00000400596 1257 ntBASIC22.53■■□□□ 1.2
SMRP1Q8NCR6 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC22.53■■□□□ 1.2
SMRP1Q8NCR6 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC22.53■■□□□ 1.2
SMRP1Q8NCR6 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
SMRP1Q8NCR6 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC22.53■■□□□ 1.2
SMRP1Q8NCR6 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SMRP1Q8NCR6 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
SMRP1Q8NCR6 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SMRP1Q8NCR6 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
SMRP1Q8NCR6 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
SMRP1Q8NCR6 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SMRP1Q8NCR6 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
SMRP1Q8NCR6 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
SMRP1Q8NCR6 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
SMRP1Q8NCR6 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC22.52■■□□□ 1.2
SMRP1Q8NCR6 AL512625.2-201ENST00000417533 625 ntBASIC22.52■■□□□ 1.2
SMRP1Q8NCR6 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC22.52■■□□□ 1.2
SMRP1Q8NCR6 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
SMRP1Q8NCR6 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
SMRP1Q8NCR6 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC22.52■■□□□ 1.2
SMRP1Q8NCR6 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC22.52■■□□□ 1.2
SMRP1Q8NCR6 AC142381.3-201ENST00000568208 1670 ntBASIC22.52■■□□□ 1.2
SMRP1Q8NCR6 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC22.51■■□□□ 1.19
SMRP1Q8NCR6 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SMRP1Q8NCR6 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SMRP1Q8NCR6 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
SMRP1Q8NCR6 AC093787.1-201ENST00000450396 207 ntBASIC22.51■■□□□ 1.19
SMRP1Q8NCR6 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
SMRP1Q8NCR6 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC22.51■■□□□ 1.19
SMRP1Q8NCR6 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC22.51■■□□□ 1.19
SMRP1Q8NCR6 MYC-209ENST00000641252 345 ntBASIC22.51■■□□□ 1.19
SMRP1Q8NCR6 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
SMRP1Q8NCR6 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC22.5■■□□□ 1.19
SMRP1Q8NCR6 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC22.5■■□□□ 1.19
SMRP1Q8NCR6 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC22.5■■□□□ 1.19
SMRP1Q8NCR6 FXN-202ENST00000396364 980 ntTSL 5 BASIC22.5■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms