Protein–RNA interactions for Protein: Q8N668

COMMD1, COMM domain-containing protein 1, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1Q8N668 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC17.82■□□□□ 0.44
COMMD1Q8N668 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC17.82■□□□□ 0.44
COMMD1Q8N668 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
COMMD1Q8N668 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC17.82■□□□□ 0.44
COMMD1Q8N668 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COMMD1Q8N668 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COMMD1Q8N668 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COMMD1Q8N668 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COMMD1Q8N668 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
COMMD1Q8N668 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
COMMD1Q8N668 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
COMMD1Q8N668 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
COMMD1Q8N668 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
COMMD1Q8N668 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC17.81■□□□□ 0.44
COMMD1Q8N668 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
COMMD1Q8N668 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
COMMD1Q8N668 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
COMMD1Q8N668 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
COMMD1Q8N668 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
COMMD1Q8N668 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC17.81■□□□□ 0.44
COMMD1Q8N668 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
COMMD1Q8N668 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
COMMD1Q8N668 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
COMMD1Q8N668 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
COMMD1Q8N668 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
COMMD1Q8N668 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
COMMD1Q8N668 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC17.8■□□□□ 0.44
COMMD1Q8N668 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC17.8■□□□□ 0.44
COMMD1Q8N668 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC17.8■□□□□ 0.44
COMMD1Q8N668 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
COMMD1Q8N668 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC17.8■□□□□ 0.44
COMMD1Q8N668 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
COMMD1Q8N668 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
COMMD1Q8N668 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
COMMD1Q8N668 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC17.8■□□□□ 0.44
COMMD1Q8N668 QDPR-206ENST00000508623 601 ntTSL 3 BASIC17.8■□□□□ 0.44
COMMD1Q8N668 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC17.8■□□□□ 0.44
COMMD1Q8N668 MIR4466-201ENST00000606121 54 ntBASIC17.8■□□□□ 0.44
COMMD1Q8N668 RALB-208ENST00000631312 311 ntTSL 5 BASIC17.8■□□□□ 0.44
COMMD1Q8N668 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
COMMD1Q8N668 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
COMMD1Q8N668 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
COMMD1Q8N668 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
COMMD1Q8N668 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
COMMD1Q8N668 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
COMMD1Q8N668 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
COMMD1Q8N668 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
COMMD1Q8N668 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
COMMD1Q8N668 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
COMMD1Q8N668 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
COMMD1Q8N668 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
COMMD1Q8N668 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
COMMD1Q8N668 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC17.79■□□□□ 0.44
COMMD1Q8N668 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
COMMD1Q8N668 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
COMMD1Q8N668 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
COMMD1Q8N668 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
COMMD1Q8N668 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
COMMD1Q8N668 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
COMMD1Q8N668 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
COMMD1Q8N668 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
COMMD1Q8N668 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
COMMD1Q8N668 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
COMMD1Q8N668 LINC01521-201ENST00000504184 1943 ntBASIC17.78■□□□□ 0.44
COMMD1Q8N668 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
COMMD1Q8N668 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
COMMD1Q8N668 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
COMMD1Q8N668 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
COMMD1Q8N668 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
COMMD1Q8N668 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
COMMD1Q8N668 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
COMMD1Q8N668 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC17.78■□□□□ 0.44
COMMD1Q8N668 RNF165-205ENST00000588679 2904 ntBASIC17.78■□□□□ 0.44
COMMD1Q8N668 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
COMMD1Q8N668 DUX4L19-201ENST00000557448 1267 ntBASIC17.78■□□□□ 0.44
COMMD1Q8N668 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC17.78■□□□□ 0.44
COMMD1Q8N668 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
COMMD1Q8N668 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
COMMD1Q8N668 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC17.78■□□□□ 0.44
COMMD1Q8N668 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
COMMD1Q8N668 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
COMMD1Q8N668 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC17.78■□□□□ 0.44
COMMD1Q8N668 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
COMMD1Q8N668 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC17.78■□□□□ 0.44
COMMD1Q8N668 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
COMMD1Q8N668 GATM-206ENST00000558336 1522 ntTSL 2 BASIC17.77■□□□□ 0.44
COMMD1Q8N668 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
COMMD1Q8N668 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
COMMD1Q8N668 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
COMMD1Q8N668 H19-210ENST00000439725 1929 ntTSL 2 BASIC17.77■□□□□ 0.44
COMMD1Q8N668 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC17.77■□□□□ 0.44
COMMD1Q8N668 MTURN-203ENST00000409688 843 ntTSL 2 BASIC17.77■□□□□ 0.44
COMMD1Q8N668 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC17.77■□□□□ 0.44
COMMD1Q8N668 AL139246.5-201ENST00000606645 996 ntBASIC17.77■□□□□ 0.44
COMMD1Q8N668 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
COMMD1Q8N668 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
COMMD1Q8N668 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
COMMD1Q8N668 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
COMMD1Q8N668 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
COMMD1Q8N668 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC17.77■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms