Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
SLX4Q8IY92 AC068338.2-201ENST00000563278 1430 ntBASIC26.72■■□□□ 1.87
SLX4Q8IY92 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC26.72■■□□□ 1.87
SLX4Q8IY92 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC26.72■■□□□ 1.87
SLX4Q8IY92 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC26.72■■□□□ 1.87
SLX4Q8IY92 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
SLX4Q8IY92 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC26.71■■□□□ 1.87
SLX4Q8IY92 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
SLX4Q8IY92 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC26.71■■□□□ 1.87
SLX4Q8IY92 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC26.71■■□□□ 1.87
SLX4Q8IY92 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC26.71■■□□□ 1.87
SLX4Q8IY92 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC26.71■■□□□ 1.87
SLX4Q8IY92 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC26.71■■□□□ 1.87
SLX4Q8IY92 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
SLX4Q8IY92 AC004812.2-201ENST00000611079 2094 ntBASIC26.71■■□□□ 1.87
SLX4Q8IY92 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC26.7■■□□□ 1.87
SLX4Q8IY92 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC26.7■■□□□ 1.87
SLX4Q8IY92 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC26.7■■□□□ 1.87
SLX4Q8IY92 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC26.7■■□□□ 1.87
SLX4Q8IY92 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC26.69■■□□□ 1.86
SLX4Q8IY92 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
SLX4Q8IY92 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC26.69■■□□□ 1.86
SLX4Q8IY92 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
SLX4Q8IY92 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
SLX4Q8IY92 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC26.69■■□□□ 1.86
SLX4Q8IY92 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
SLX4Q8IY92 MKRN4P-201ENST00000444706 1521 ntBASIC26.69■■□□□ 1.86
SLX4Q8IY92 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC26.69■■□□□ 1.86
SLX4Q8IY92 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC26.69■■□□□ 1.86
SLX4Q8IY92 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
SLX4Q8IY92 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
SLX4Q8IY92 AC083880.1-201ENST00000608266 535 ntBASIC26.68■■□□□ 1.86
SLX4Q8IY92 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
SLX4Q8IY92 PPP1R14BP2-201ENST00000426284 444 ntBASIC26.67■■□□□ 1.86
SLX4Q8IY92 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC26.67■■□□□ 1.86
SLX4Q8IY92 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC26.67■■□□□ 1.86
SLX4Q8IY92 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC26.67■■□□□ 1.86
SLX4Q8IY92 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC26.67■■□□□ 1.86
SLX4Q8IY92 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
SLX4Q8IY92 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
SLX4Q8IY92 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
SLX4Q8IY92 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC26.67■■□□□ 1.86
SLX4Q8IY92 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC26.66■■□□□ 1.86
SLX4Q8IY92 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
SLX4Q8IY92 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC26.66■■□□□ 1.86
SLX4Q8IY92 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
SLX4Q8IY92 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC26.66■■□□□ 1.86
SLX4Q8IY92 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
SLX4Q8IY92 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC26.66■■□□□ 1.86
SLX4Q8IY92 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC26.65■■□□□ 1.86
SLX4Q8IY92 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
SLX4Q8IY92 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC26.65■■□□□ 1.86
SLX4Q8IY92 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
SLX4Q8IY92 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC26.65■■□□□ 1.86
SLX4Q8IY92 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC26.65■■□□□ 1.86
SLX4Q8IY92 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
SLX4Q8IY92 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC26.65■■□□□ 1.86
SLX4Q8IY92 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC26.65■■□□□ 1.86
SLX4Q8IY92 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
SLX4Q8IY92 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC26.65■■□□□ 1.86
SLX4Q8IY92 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC26.65■■□□□ 1.86
SLX4Q8IY92 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
SLX4Q8IY92 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC26.65■■□□□ 1.86
SLX4Q8IY92 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
SLX4Q8IY92 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
SLX4Q8IY92 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC26.64■■□□□ 1.85
SLX4Q8IY92 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC26.64■■□□□ 1.85
SLX4Q8IY92 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
SLX4Q8IY92 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC26.64■■□□□ 1.85
SLX4Q8IY92 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
SLX4Q8IY92 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
SLX4Q8IY92 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC26.63■■□□□ 1.85
SLX4Q8IY92 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC26.63■■□□□ 1.85
SLX4Q8IY92 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC26.63■■□□□ 1.85
SLX4Q8IY92 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC26.63■■□□□ 1.85
SLX4Q8IY92 MIR4758-201ENST00000577688 71 ntBASIC26.63■■□□□ 1.85
SLX4Q8IY92 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
SLX4Q8IY92 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC26.63■■□□□ 1.85
SLX4Q8IY92 BMP1-204ENST00000397814 836 ntTSL 4 BASIC26.62■■□□□ 1.85
SLX4Q8IY92 RARRES2P4-201ENST00000514074 484 ntBASIC26.62■■□□□ 1.85
SLX4Q8IY92 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC26.62■■□□□ 1.85
SLX4Q8IY92 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC26.62■■□□□ 1.85
SLX4Q8IY92 ABCB10P4-201ENST00000566803 2184 ntBASIC26.62■■□□□ 1.85
SLX4Q8IY92 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
SLX4Q8IY92 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC26.62■■□□□ 1.85
SLX4Q8IY92 AL139125.2-201ENST00000623134 1869 ntBASIC26.62■■□□□ 1.85
SLX4Q8IY92 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
SLX4Q8IY92 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC26.62■■□□□ 1.85
SLX4Q8IY92 KRT18P29-201ENST00000397031 1267 ntBASIC26.62■■□□□ 1.85
SLX4Q8IY92 AC007322.4-201ENST00000509611 723 ntBASIC26.62■■□□□ 1.85
SLX4Q8IY92 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC26.62■■□□□ 1.85
SLX4Q8IY92 AC016405.3-201ENST00000607710 860 ntBASIC26.62■■□□□ 1.85
SLX4Q8IY92 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC26.62■■□□□ 1.85
SLX4Q8IY92 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
SLX4Q8IY92 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
SLX4Q8IY92 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
SLX4Q8IY92 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
SLX4Q8IY92 MIPEPP3-201ENST00000412105 444 ntBASIC26.61■■□□□ 1.85
SLX4Q8IY92 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
SLX4Q8IY92 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms