Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRIM42Q8IWZ5 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.47■■□□□ 1.03
TRIM42Q8IWZ5 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
TRIM42Q8IWZ5 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.47■■□□□ 1.03
TRIM42Q8IWZ5 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRIM42Q8IWZ5 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRIM42Q8IWZ5 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
TRIM42Q8IWZ5 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRIM42Q8IWZ5 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
TRIM42Q8IWZ5 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
TRIM42Q8IWZ5 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM42Q8IWZ5 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
TRIM42Q8IWZ5 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.46■■□□□ 1.03
TRIM42Q8IWZ5 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
TRIM42Q8IWZ5 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.46■■□□□ 1.03
TRIM42Q8IWZ5 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
TRIM42Q8IWZ5 AC103724.3-201ENST00000564481 992 ntBASIC21.46■■□□□ 1.03
TRIM42Q8IWZ5 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM42Q8IWZ5 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.46■■□□□ 1.03
TRIM42Q8IWZ5 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM42Q8IWZ5 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM42Q8IWZ5 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM42Q8IWZ5 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM42Q8IWZ5 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.45■■□□□ 1.02
TRIM42Q8IWZ5 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC21.45■■□□□ 1.02
TRIM42Q8IWZ5 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM42Q8IWZ5 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
TRIM42Q8IWZ5 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM42Q8IWZ5 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM42Q8IWZ5 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM42Q8IWZ5 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM42Q8IWZ5 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM42Q8IWZ5 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM42Q8IWZ5 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM42Q8IWZ5 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC21.44■■□□□ 1.02
TRIM42Q8IWZ5 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRIM42Q8IWZ5 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.44■■□□□ 1.02
TRIM42Q8IWZ5 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRIM42Q8IWZ5 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRIM42Q8IWZ5 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TRIM42Q8IWZ5 AL451085.2-201ENST00000605085 799 ntBASIC21.44■■□□□ 1.02
TRIM42Q8IWZ5 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.44■■□□□ 1.02
TRIM42Q8IWZ5 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC21.44■■□□□ 1.02
TRIM42Q8IWZ5 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TRIM42Q8IWZ5 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
TRIM42Q8IWZ5 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC21.44■■□□□ 1.02
TRIM42Q8IWZ5 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
TRIM42Q8IWZ5 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
TRIM42Q8IWZ5 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRIM42Q8IWZ5 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC21.43■■□□□ 1.02
TRIM42Q8IWZ5 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRIM42Q8IWZ5 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
TRIM42Q8IWZ5 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRIM42Q8IWZ5 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
TRIM42Q8IWZ5 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
TRIM42Q8IWZ5 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.43■■□□□ 1.02
TRIM42Q8IWZ5 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
TRIM42Q8IWZ5 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.43■■□□□ 1.02
TRIM42Q8IWZ5 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TRIM42Q8IWZ5 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.43■■□□□ 1.02
TRIM42Q8IWZ5 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRIM42Q8IWZ5 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRIM42Q8IWZ5 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRIM42Q8IWZ5 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TRIM42Q8IWZ5 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRIM42Q8IWZ5 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
TRIM42Q8IWZ5 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TRIM42Q8IWZ5 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
TRIM42Q8IWZ5 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
TRIM42Q8IWZ5 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.42■■□□□ 1.02
TRIM42Q8IWZ5 AC004687.1-201ENST00000579003 1625 ntBASIC21.42■■□□□ 1.02
TRIM42Q8IWZ5 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.42■■□□□ 1.02
TRIM42Q8IWZ5 AL031848.2-201ENST00000607670 837 ntBASIC21.42■■□□□ 1.02
TRIM42Q8IWZ5 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
TRIM42Q8IWZ5 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
TRIM42Q8IWZ5 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
TRIM42Q8IWZ5 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
TRIM42Q8IWZ5 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRIM42Q8IWZ5 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.41■■□□□ 1.02
TRIM42Q8IWZ5 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.41■■□□□ 1.02
TRIM42Q8IWZ5 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
TRIM42Q8IWZ5 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRIM42Q8IWZ5 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.41■■□□□ 1.02
TRIM42Q8IWZ5 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRIM42Q8IWZ5 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRIM42Q8IWZ5 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRIM42Q8IWZ5 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC21.41■■□□□ 1.02
TRIM42Q8IWZ5 MIR6722-201ENST00000617286 78 ntBASIC21.41■■□□□ 1.02
TRIM42Q8IWZ5 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.41■■□□□ 1.02
TRIM42Q8IWZ5 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRIM42Q8IWZ5 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRIM42Q8IWZ5 FEM1AP4-201ENST00000443167 1987 ntBASIC21.41■■□□□ 1.02
TRIM42Q8IWZ5 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
TRIM42Q8IWZ5 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.41■■□□□ 1.02
TRIM42Q8IWZ5 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRIM42Q8IWZ5 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRIM42Q8IWZ5 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TRIM42Q8IWZ5 AC073130.3-201ENST00000624389 2278 ntBASIC21.4■■□□□ 1.02
TRIM42Q8IWZ5 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRIM42Q8IWZ5 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.4■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms