Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
LRRTM1Q86UE6 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LRRTM1Q86UE6 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
LRRTM1Q86UE6 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC18.74■□□□□ 0.59
LRRTM1Q86UE6 YBX1P4-201ENST00000392794 808 ntBASIC18.74■□□□□ 0.59
LRRTM1Q86UE6 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC18.74■□□□□ 0.59
LRRTM1Q86UE6 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LRRTM1Q86UE6 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.74■□□□□ 0.59
LRRTM1Q86UE6 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LRRTM1Q86UE6 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LRRTM1Q86UE6 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC18.74■□□□□ 0.59
LRRTM1Q86UE6 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRRTM1Q86UE6 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LRRTM1Q86UE6 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
LRRTM1Q86UE6 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LRRTM1Q86UE6 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
LRRTM1Q86UE6 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC18.73■□□□□ 0.59
LRRTM1Q86UE6 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRRTM1Q86UE6 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC18.73■□□□□ 0.59
LRRTM1Q86UE6 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC18.73■□□□□ 0.59
LRRTM1Q86UE6 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRRTM1Q86UE6 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC18.73■□□□□ 0.59
LRRTM1Q86UE6 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC18.73■□□□□ 0.59
LRRTM1Q86UE6 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC18.73■□□□□ 0.59
LRRTM1Q86UE6 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
LRRTM1Q86UE6 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRRTM1Q86UE6 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRRTM1Q86UE6 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRRTM1Q86UE6 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRRTM1Q86UE6 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LRRTM1Q86UE6 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LRRTM1Q86UE6 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LRRTM1Q86UE6 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.73■□□□□ 0.59
LRRTM1Q86UE6 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LRRTM1Q86UE6 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRRTM1Q86UE6 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.72■□□□□ 0.59
LRRTM1Q86UE6 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
LRRTM1Q86UE6 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LRRTM1Q86UE6 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LRRTM1Q86UE6 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRRTM1Q86UE6 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.72■□□□□ 0.59
LRRTM1Q86UE6 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
LRRTM1Q86UE6 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.72■□□□□ 0.59
LRRTM1Q86UE6 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LRRTM1Q86UE6 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LRRTM1Q86UE6 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LRRTM1Q86UE6 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LRRTM1Q86UE6 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.71■□□□□ 0.59
LRRTM1Q86UE6 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
LRRTM1Q86UE6 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
LRRTM1Q86UE6 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
LRRTM1Q86UE6 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
LRRTM1Q86UE6 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
LRRTM1Q86UE6 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC18.71■□□□□ 0.59
LRRTM1Q86UE6 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LRRTM1Q86UE6 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
LRRTM1Q86UE6 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC18.71■□□□□ 0.59
LRRTM1Q86UE6 AL031848.2-201ENST00000607670 837 ntBASIC18.71■□□□□ 0.59
LRRTM1Q86UE6 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LRRTM1Q86UE6 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LRRTM1Q86UE6 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LRRTM1Q86UE6 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LRRTM1Q86UE6 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
LRRTM1Q86UE6 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LRRTM1Q86UE6 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.71■□□□□ 0.59
LRRTM1Q86UE6 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
LRRTM1Q86UE6 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LRRTM1Q86UE6 C17orf82-201ENST00000623772 1530 ntBASIC18.7■□□□□ 0.58
LRRTM1Q86UE6 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
LRRTM1Q86UE6 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC18.7■□□□□ 0.58
LRRTM1Q86UE6 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
LRRTM1Q86UE6 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.7■□□□□ 0.58
LRRTM1Q86UE6 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LRRTM1Q86UE6 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18.7■□□□□ 0.58
LRRTM1Q86UE6 AC026471.6-201ENST00000622954 1905 ntBASIC18.7■□□□□ 0.58
LRRTM1Q86UE6 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LRRTM1Q86UE6 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LRRTM1Q86UE6 VGF-203ENST00000611537 1622 ntTSL 5 BASIC18.7■□□□□ 0.58
LRRTM1Q86UE6 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.7■□□□□ 0.58
LRRTM1Q86UE6 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
LRRTM1Q86UE6 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.7■□□□□ 0.58
LRRTM1Q86UE6 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LRRTM1Q86UE6 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LRRTM1Q86UE6 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LRRTM1Q86UE6 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LRRTM1Q86UE6 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC18.69■□□□□ 0.58
LRRTM1Q86UE6 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC18.69■□□□□ 0.58
LRRTM1Q86UE6 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC18.69■□□□□ 0.58
LRRTM1Q86UE6 AL499627.2-201ENST00000606283 725 ntBASIC18.69■□□□□ 0.58
LRRTM1Q86UE6 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC18.69■□□□□ 0.58
LRRTM1Q86UE6 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LRRTM1Q86UE6 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LRRTM1Q86UE6 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LRRTM1Q86UE6 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.69■□□□□ 0.58
LRRTM1Q86UE6 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRRTM1Q86UE6 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRRTM1Q86UE6 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LRRTM1Q86UE6 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRRTM1Q86UE6 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRRTM1Q86UE6 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms