Protein–RNA interactions for Protein: Q86TJ5

ZNF554, Zinc finger protein 554, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF554Q86TJ5 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF554Q86TJ5 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF554Q86TJ5 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF554Q86TJ5 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.43■□□□□ 0.7
ZNF554Q86TJ5 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
ZNF554Q86TJ5 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF554Q86TJ5 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF554Q86TJ5 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.43■□□□□ 0.7
ZNF554Q86TJ5 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.42■□□□□ 0.7
ZNF554Q86TJ5 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF554Q86TJ5 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.42■□□□□ 0.7
ZNF554Q86TJ5 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF554Q86TJ5 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF554Q86TJ5 AL158211.5-201ENST00000623583 2518 ntBASIC19.42■□□□□ 0.7
ZNF554Q86TJ5 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC19.42■□□□□ 0.7
ZNF554Q86TJ5 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC19.42■□□□□ 0.7
ZNF554Q86TJ5 AC018755.3-202ENST00000596210 929 ntBASIC19.42■□□□□ 0.7
ZNF554Q86TJ5 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF554Q86TJ5 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF554Q86TJ5 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF554Q86TJ5 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
ZNF554Q86TJ5 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF554Q86TJ5 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
ZNF554Q86TJ5 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF554Q86TJ5 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.42■□□□□ 0.7
ZNF554Q86TJ5 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF554Q86TJ5 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF554Q86TJ5 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF554Q86TJ5 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.42■□□□□ 0.7
ZNF554Q86TJ5 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
ZNF554Q86TJ5 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF554Q86TJ5 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF554Q86TJ5 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.41■□□□□ 0.7
ZNF554Q86TJ5 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF554Q86TJ5 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF554Q86TJ5 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF554Q86TJ5 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC19.41■□□□□ 0.7
ZNF554Q86TJ5 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF554Q86TJ5 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
ZNF554Q86TJ5 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF554Q86TJ5 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF554Q86TJ5 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF554Q86TJ5 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF554Q86TJ5 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.41■□□□□ 0.7
ZNF554Q86TJ5 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.41■□□□□ 0.7
ZNF554Q86TJ5 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF554Q86TJ5 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF554Q86TJ5 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.4■□□□□ 0.7
ZNF554Q86TJ5 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF554Q86TJ5 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF554Q86TJ5 RPS2P7-201ENST00000447334 885 ntBASIC19.4■□□□□ 0.7
ZNF554Q86TJ5 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC19.4■□□□□ 0.7
ZNF554Q86TJ5 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF554Q86TJ5 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF554Q86TJ5 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF554Q86TJ5 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.4■□□□□ 0.7
ZNF554Q86TJ5 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF554Q86TJ5 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF554Q86TJ5 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
ZNF554Q86TJ5 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.7
ZNF554Q86TJ5 AC010542.4-201ENST00000563151 1910 ntBASIC19.39■□□□□ 0.7
ZNF554Q86TJ5 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ZNF554Q86TJ5 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
ZNF554Q86TJ5 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
ZNF554Q86TJ5 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
ZNF554Q86TJ5 IDNK-203ENST00000405990 629 ntTSL 2 BASIC19.39■□□□□ 0.69
ZNF554Q86TJ5 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
ZNF554Q86TJ5 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ZNF554Q86TJ5 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC19.39■□□□□ 0.69
ZNF554Q86TJ5 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
ZNF554Q86TJ5 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC19.39■□□□□ 0.69
ZNF554Q86TJ5 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
ZNF554Q86TJ5 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
ZNF554Q86TJ5 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
ZNF554Q86TJ5 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.38■□□□□ 0.69
ZNF554Q86TJ5 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC19.38■□□□□ 0.69
ZNF554Q86TJ5 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ZNF554Q86TJ5 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.38■□□□□ 0.69
ZNF554Q86TJ5 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ZNF554Q86TJ5 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.37■□□□□ 0.69
ZNF554Q86TJ5 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ZNF554Q86TJ5 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ZNF554Q86TJ5 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
ZNF554Q86TJ5 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC19.37■□□□□ 0.69
ZNF554Q86TJ5 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ZNF554Q86TJ5 HYI-213ENST00000583037 1322 ntTSL 5 BASIC19.37■□□□□ 0.69
ZNF554Q86TJ5 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ZNF554Q86TJ5 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
ZNF554Q86TJ5 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ZNF554Q86TJ5 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
ZNF554Q86TJ5 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.37■□□□□ 0.69
ZNF554Q86TJ5 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ZNF554Q86TJ5 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
ZNF554Q86TJ5 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
ZNF554Q86TJ5 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
ZNF554Q86TJ5 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
ZNF554Q86TJ5 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
ZNF554Q86TJ5 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ZNF554Q86TJ5 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ZNF554Q86TJ5 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms