Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 SEC24C-202ENST00000345254 4433 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.959e-6■■■■□ 21.5
LARP4Q71RC2 CUX1-201ENST00000292535 13747 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.999e-6■■■■□ 21.5
LARP4Q71RC2 MPDU1-212ENST00000574558 900 ntTSL 38.36□□□□□ -1.079e-11■■■■□ 21.5
LARP4Q71RC2 CCNB2-205ENST00000621385 2503 ntTSL 1 (best) BASIC8.29□□□□□ -1.089e-11■■■■□ 21.5
LARP4Q71RC2 GSTM4-203ENST00000369833 3990 ntTSL 5 BASIC8.26□□□□□ -1.099e-11■■■■□ 21.5
LARP4Q71RC2 FUNDC2-202ENST00000456179 871 ntTSL 38.19□□□□□ -1.19e-6■■■■□ 21.5
LARP4Q71RC2 AC092757.2-201ENST00000559026 633 ntTSL 4 BASIC7.38□□□□□ -1.239e-11■■■■□ 21.5
LARP4Q71RC2 FUNDC2-207ENST00000492303 3685 ntTSL 27.08□□□□□ -1.289e-6■■■■□ 21.5
LARP4Q71RC2 FUNDC2-203ENST00000471528 765 ntTSL 36.75□□□□□ -1.339e-6■■■■□ 21.5
LARP4Q71RC2 CUX1-220ENST00000607092 559 ntTSL 35.68□□□□□ -1.59e-6■■■■□ 21.5
LARP4Q71RC2 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.719e-6■■■■□ 21.5
LARP4Q71RC2 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC6.02□□□□□ -1.453e-7■■■■□ 21.5
LARP4Q71RC2 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.333e-6■■■■□ 21.4
LARP4Q71RC2 SUSD2-202ENST00000463101 4938 ntTSL 213.55□□□□□ -0.243e-6■■■■□ 21.4
LARP4Q71RC2 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.363e-6■■■■□ 21.4
LARP4Q71RC2 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.493e-6■■■■□ 21.4
LARP4Q71RC2 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.78■□□□□ 0.283e-6■■■■□ 21.4
LARP4Q71RC2 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC13.83□□□□□ -0.25e-7■■■■□ 21.4
LARP4Q71RC2 ZNF292-207ENST00000496806 770 ntTSL 312.89□□□□□ -0.351e-7■■■■□ 21.4
LARP4Q71RC2 ABCA11P-203ENST00000507854 1503 ntTSL 1 (best)10.47□□□□□ -0.735e-7■■■■□ 21.4
LARP4Q71RC2 ABCA11P-201ENST00000451020 1815 ntTSL 2 BASIC9.03□□□□□ -0.965e-7■■■■□ 21.4
LARP4Q71RC2 ZNF721-206ENST00000515578 1679 ntTSL 1 (best)8.82□□□□□ -15e-7■■■■□ 21.4
LARP4Q71RC2 ZNF721-203ENST00000506646 935 ntTSL 2 BASIC7.29□□□□□ -1.245e-7■■■■□ 21.4
LARP4Q71RC2 ABCA11P-204ENST00000514396 1423 ntTSL 1 (best)6.15□□□□□ -1.435e-7■■■■□ 21.4
LARP4Q71RC2 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.8□□□□□ -1.485e-7■■■■□ 21.4
LARP4Q71RC2 ZNF721-204ENST00000507078 355 ntTSL 53□□□□□ -1.935e-7■■■■□ 21.4
LARP4Q71RC2 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.944e-8■■■■□ 21.4
LARP4Q71RC2 DRAP1-206ENST00000530791 837 ntTSL 217.8■□□□□ 0.444e-8■■■■□ 21.4
LARP4Q71RC2 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.08■□□□□ 0.324e-8■■■■□ 21.4
LARP4Q71RC2 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC13.95□□□□□ -0.184e-8■■■■□ 21.4
LARP4Q71RC2 ATP5G1-205ENST00000504591 401 ntTSL 29.7□□□□□ -0.866e-9■■■■□ 21.4
LARP4Q71RC2 ATP5G1-209ENST00000514808 359 ntTSL 2 BASIC9.35□□□□□ -0.916e-9■■■■□ 21.4
LARP4Q71RC2 GSTP1-203ENST00000467591 736 ntTSL 210.31□□□□□ -0.765e-8■■■■□ 21.4
LARP4Q71RC2 NPM3-202ENST00000462391 481 ntTSL 319.4■□□□□ 0.74e-7■■■■□ 21.4
LARP4Q71RC2 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC5.99□□□□□ -1.453e-7■■■■□ 21.4
LARP4Q71RC2 YWHAB-207ENST00000631616 5867 ntTSL 1 (best)16.22■□□□□ 0.196e-10■■■■□ 21.4
LARP4Q71RC2 YWHAB-206ENST00000479421 1097 ntTSL 510.04□□□□□ -0.86e-10■■■■□ 21.4
LARP4Q71RC2 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.442e-10■■■■□ 21.4
LARP4Q71RC2 RPL9-205ENST00000503277 769 ntTSL 28.69□□□□□ -1.022e-10■■■■□ 21.4
LARP4Q71RC2 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.452e-12■■■■□ 21.4
LARP4Q71RC2 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC22.79■■□□□ 1.242e-12■■■■□ 21.4
LARP4Q71RC2 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.132e-12■■■■□ 21.4
LARP4Q71RC2 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.622e-12■■■■□ 21.4
LARP4Q71RC2 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.322e-12■■■■□ 21.4
LARP4Q71RC2 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.042e-12■■■■□ 21.4
LARP4Q71RC2 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC14.54□□□□□ -0.082e-12■■■■□ 21.4
LARP4Q71RC2 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.254e-17■■■■□ 21.4
LARP4Q71RC2 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.264e-17■■■■□ 21.4
LARP4Q71RC2 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.414e-17■■■■□ 21.4
LARP4Q71RC2 IFITM3-203ENST00000531688 500 ntTSL 39.24□□□□□ -0.934e-17■■■■□ 21.4
LARP4Q71RC2 PRPF6-201ENST00000266079 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.441e-7■■■■□ 21.3
LARP4Q71RC2 C19orf70-202ENST00000585605 586 ntTSL 315.39■□□□□ 0.051e-6■■■■□ 21.3
LARP4Q71RC2 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.031e-6■■■■□ 21.3
LARP4Q71RC2 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC13.34□□□□□ -0.271e-6■■■■□ 21.3
LARP4Q71RC2 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.461e-6■■■■□ 21.3
LARP4Q71RC2 PRKCB-210ENST00000498739 569 ntTSL 415.53■□□□□ 0.081e-6■■■■□ 21.3
LARP4Q71RC2 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.291e-6■■■■□ 21.3
LARP4Q71RC2 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.656e-15■■■■□ 21.3
LARP4Q71RC2 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.549e-10■■■■□ 21.3
LARP4Q71RC2 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.59e-10■■■■□ 21.3
LARP4Q71RC2 PIGT-235ENST00000638967 2194 ntTSL 57.43□□□□□ -1.222e-6■■■■□ 21.3
LARP4Q71RC2 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.244e-10■■■■□ 21.2
LARP4Q71RC2 PDAP1-204ENST00000496335 302 ntTSL 313.23□□□□□ -0.294e-10■■■■□ 21.2
LARP4Q71RC2 APOM-201ENST00000375916 1184 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.967e-17■■■■□ 21.2
LARP4Q71RC2 APOM-203ENST00000375920 709 ntTSL 1 (best) BASIC9.07□□□□□ -0.967e-17■■■■□ 21.2
LARP4Q71RC2 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.33■□□□□ 0.842e-7■■■■□ 21.2
LARP4Q71RC2 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.692e-7■■■■□ 21.2
LARP4Q71RC2 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.612e-7■■■■□ 21.2
LARP4Q71RC2 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.84■□□□□ 0.612e-7■■■■□ 21.2
LARP4Q71RC2 GMPPA-207ENST00000443704 1783 ntTSL 517.39■□□□□ 0.372e-7■■■■□ 21.2
LARP4Q71RC2 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.152e-7■■■■□ 21.2
LARP4Q71RC2 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.032e-7■■■■□ 21.2
LARP4Q71RC2 GMPPA-211ENST00000481170 4942 ntTSL 212.43□□□□□ -0.422e-7■■■■□ 21.2
LARP4Q71RC2 MGST3-211ENST00000494074 772 ntTSL 27.6□□□□□ -1.196e-7■■■■□ 21.2
LARP4Q71RC2 COA3-202ENST00000586680 1374 ntTSL 217.93■□□□□ 0.467e-7■■■■□ 21.2
LARP4Q71RC2 COA3-201ENST00000328434 771 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.767e-7■■■■□ 21.2
LARP4Q71RC2 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.183e-6■■■■□ 21.2
LARP4Q71RC2 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.34■□□□□ 0.213e-6■■■■□ 21.2
LARP4Q71RC2 DGAT2-204ENST00000603363 5926 ntTSL 210.28□□□□□ -0.763e-6■■■■□ 21.2
LARP4Q71RC2 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.324e-11■■■■□ 21.2
LARP4Q71RC2 ARPC1B-220ENST00000491294 1051 ntTSL 516.19■□□□□ 0.184e-11■■■■□ 21.2
LARP4Q71RC2 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.114e-11■■■■□ 21.2
LARP4Q71RC2 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.074e-11■■■■□ 21.2
LARP4Q71RC2 ARPC1B-217ENST00000481997 945 ntTSL 214.49□□□□□ -0.094e-11■■■■□ 21.2
LARP4Q71RC2 ARPC1B-214ENST00000463078 537 ntTSL 313.8□□□□□ -0.24e-11■■■■□ 21.2
LARP4Q71RC2 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.791e-8■■■■□ 21.2
LARP4Q71RC2 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.88■□□□□ 0.771e-8■■■■□ 21.2
LARP4Q71RC2 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.88■□□□□ 0.771e-8■■■■□ 21.2
LARP4Q71RC2 STOML2-204ENST00000488050 904 ntTSL 59.48□□□□□ -0.891e-8■■■■□ 21.2
LARP4Q71RC2 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC5.53□□□□□ -1.523e-6■■■■□ 21.2
LARP4Q71RC2 ATP5J2-203ENST00000394186 305 ntAPPRIS P1 TSL 2 BASIC7.72□□□□□ -1.171e-9■■■■□ 21.2
LARP4Q71RC2 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.395e-7■■■■□ 21.2
LARP4Q71RC2 COX6C-203ENST00000518171 724 ntAPPRIS P1 TSL 2 BASIC8.68□□□□□ -1.028e-11■■■■□ 21.1
LARP4Q71RC2 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.318e-11■■■■□ 21.1
LARP4Q71RC2 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.498e-7■■■■□ 21.1
LARP4Q71RC2 SMDT1-202ENST00000422252 591 ntTSL 223.24■■□□□ 1.318e-7■■■■□ 21.1
LARP4Q71RC2 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.7□□□□□ -0.066e-10■■■■□ 21.1
LARP4Q71RC2 PHB-213ENST00000513412 650 ntTSL 29.9□□□□□ -0.826e-10■■■■□ 21.1
LARP4Q71RC2 PHB-202ENST00000393345 847 ntTSL 29.47□□□□□ -0.896e-10■■■■□ 21.1
LARP4Q71RC2 PHB-204ENST00000434917 534 ntTSL 49.33□□□□□ -0.926e-10■■■■□ 21.1
Retrieved 100 of 15,922 protein–RNA pairs in 160.1 ms