Protein–RNA interactions for Protein: Q6ZMV5

PPP4R3CP, Putative SMEK homolog 3, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3CPQ6ZMV5 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC24.44■■□□□ 1.5
PPP4R3CPQ6ZMV5 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC24.44■■□□□ 1.5
PPP4R3CPQ6ZMV5 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
PPP4R3CPQ6ZMV5 AC133637.1-201ENST00000624115 1537 ntBASIC24.44■■□□□ 1.5
PPP4R3CPQ6ZMV5 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC24.44■■□□□ 1.5
PPP4R3CPQ6ZMV5 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PPP4R3CPQ6ZMV5 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
PPP4R3CPQ6ZMV5 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
PPP4R3CPQ6ZMV5 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC24.43■■□□□ 1.5
PPP4R3CPQ6ZMV5 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
PPP4R3CPQ6ZMV5 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
PPP4R3CPQ6ZMV5 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
PPP4R3CPQ6ZMV5 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
PPP4R3CPQ6ZMV5 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC24.43■■□□□ 1.5
PPP4R3CPQ6ZMV5 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC24.43■■□□□ 1.5
PPP4R3CPQ6ZMV5 MAG-206ENST00000597035 542 ntTSL 4 BASIC24.43■■□□□ 1.5
PPP4R3CPQ6ZMV5 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
PPP4R3CPQ6ZMV5 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC24.43■■□□□ 1.5
PPP4R3CPQ6ZMV5 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC24.43■■□□□ 1.5
PPP4R3CPQ6ZMV5 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC24.43■■□□□ 1.5
PPP4R3CPQ6ZMV5 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
PPP4R3CPQ6ZMV5 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC24.42■■□□□ 1.5
PPP4R3CPQ6ZMV5 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
PPP4R3CPQ6ZMV5 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC24.42■■□□□ 1.5
PPP4R3CPQ6ZMV5 ESRRAP2-201ENST00000418437 1549 ntBASIC24.42■■□□□ 1.5
PPP4R3CPQ6ZMV5 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
PPP4R3CPQ6ZMV5 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
PPP4R3CPQ6ZMV5 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
PPP4R3CPQ6ZMV5 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC24.42■■□□□ 1.5
PPP4R3CPQ6ZMV5 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
PPP4R3CPQ6ZMV5 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
PPP4R3CPQ6ZMV5 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC24.42■■□□□ 1.5
PPP4R3CPQ6ZMV5 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
PPP4R3CPQ6ZMV5 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
PPP4R3CPQ6ZMV5 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
PPP4R3CPQ6ZMV5 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
PPP4R3CPQ6ZMV5 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
PPP4R3CPQ6ZMV5 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
PPP4R3CPQ6ZMV5 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC24.42■■□□□ 1.5
PPP4R3CPQ6ZMV5 AC233723.2-201ENST00000623798 2106 ntBASIC24.41■■□□□ 1.5
PPP4R3CPQ6ZMV5 HYI-206ENST00000372434 1025 ntTSL 5 BASIC24.41■■□□□ 1.5
PPP4R3CPQ6ZMV5 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC24.41■■□□□ 1.5
PPP4R3CPQ6ZMV5 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC24.41■■□□□ 1.5
PPP4R3CPQ6ZMV5 AC073310.1-201ENST00000423226 1033 ntBASIC24.41■■□□□ 1.5
PPP4R3CPQ6ZMV5 AC007041.1-201ENST00000438989 1155 ntBASIC24.41■■□□□ 1.5
PPP4R3CPQ6ZMV5 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
PPP4R3CPQ6ZMV5 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
PPP4R3CPQ6ZMV5 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC24.41■■□□□ 1.5
PPP4R3CPQ6ZMV5 CA15P2-201ENST00000611168 834 ntBASIC24.41■■□□□ 1.5
PPP4R3CPQ6ZMV5 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC24.41■■□□□ 1.5
PPP4R3CPQ6ZMV5 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
PPP4R3CPQ6ZMV5 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC24.41■■□□□ 1.5
PPP4R3CPQ6ZMV5 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
PPP4R3CPQ6ZMV5 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC24.41■■□□□ 1.5
PPP4R3CPQ6ZMV5 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
PPP4R3CPQ6ZMV5 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PPP4R3CPQ6ZMV5 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PPP4R3CPQ6ZMV5 ZNRF2P3-201ENST00000424200 374 ntBASIC24.4■■□□□ 1.5
PPP4R3CPQ6ZMV5 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
PPP4R3CPQ6ZMV5 AL356019.1-201ENST00000553419 748 ntTSL 2 BASIC24.4■■□□□ 1.5
PPP4R3CPQ6ZMV5 AC008764.7-201ENST00000593779 1081 ntBASIC24.4■■□□□ 1.5
PPP4R3CPQ6ZMV5 AC233992.3-201ENST00000607491 485 ntBASIC24.4■■□□□ 1.5
PPP4R3CPQ6ZMV5 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
PPP4R3CPQ6ZMV5 CASC19-229ENST00000641418 1373 ntBASIC24.4■■□□□ 1.5
PPP4R3CPQ6ZMV5 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
PPP4R3CPQ6ZMV5 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC24.39■■□□□ 1.5
PPP4R3CPQ6ZMV5 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
PPP4R3CPQ6ZMV5 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC24.39■■□□□ 1.5
PPP4R3CPQ6ZMV5 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC24.39■■□□□ 1.5
PPP4R3CPQ6ZMV5 AC099791.1-201ENST00000416440 715 ntBASIC24.39■■□□□ 1.49
PPP4R3CPQ6ZMV5 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC24.39■■□□□ 1.49
PPP4R3CPQ6ZMV5 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
PPP4R3CPQ6ZMV5 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.49
PPP4R3CPQ6ZMV5 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
PPP4R3CPQ6ZMV5 COMT-203ENST00000403184 2217 ntTSL 2 BASIC24.39■■□□□ 1.49
PPP4R3CPQ6ZMV5 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
PPP4R3CPQ6ZMV5 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC24.39■■□□□ 1.49
PPP4R3CPQ6ZMV5 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
PPP4R3CPQ6ZMV5 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC24.38■■□□□ 1.49
PPP4R3CPQ6ZMV5 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PPP4R3CPQ6ZMV5 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PPP4R3CPQ6ZMV5 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
PPP4R3CPQ6ZMV5 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC24.38■■□□□ 1.49
PPP4R3CPQ6ZMV5 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PPP4R3CPQ6ZMV5 MTND2P11-201ENST00000423638 648 ntBASIC24.38■■□□□ 1.49
PPP4R3CPQ6ZMV5 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC24.38■■□□□ 1.49
PPP4R3CPQ6ZMV5 AC105265.2-201ENST00000467189 838 ntBASIC24.38■■□□□ 1.49
PPP4R3CPQ6ZMV5 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC24.38■■□□□ 1.49
PPP4R3CPQ6ZMV5 ETFRF1-209ENST00000556885 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PPP4R3CPQ6ZMV5 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
PPP4R3CPQ6ZMV5 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC24.38■■□□□ 1.49
PPP4R3CPQ6ZMV5 MPST-208ENST00000628507 698 ntTSL 5 BASIC24.38■■□□□ 1.49
PPP4R3CPQ6ZMV5 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
PPP4R3CPQ6ZMV5 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
PPP4R3CPQ6ZMV5 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
PPP4R3CPQ6ZMV5 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PPP4R3CPQ6ZMV5 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
PPP4R3CPQ6ZMV5 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC24.37■■□□□ 1.49
PPP4R3CPQ6ZMV5 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PPP4R3CPQ6ZMV5 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms