Protein–RNA interactions for Protein: Q6PEY1

TMEM88, Transmembrane protein 88, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88Q6PEY1 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM88Q6PEY1 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
TMEM88Q6PEY1 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC17.36■□□□□ 0.37
TMEM88Q6PEY1 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC17.36■□□□□ 0.37
TMEM88Q6PEY1 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM88Q6PEY1 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.36■□□□□ 0.37
TMEM88Q6PEY1 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM88Q6PEY1 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM88Q6PEY1 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
TMEM88Q6PEY1 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM88Q6PEY1 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC17.36■□□□□ 0.37
TMEM88Q6PEY1 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM88Q6PEY1 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM88Q6PEY1 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM88Q6PEY1 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM88Q6PEY1 AFG3L1P-217ENST00000557444 2447 ntBASIC17.35■□□□□ 0.37
TMEM88Q6PEY1 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC17.35■□□□□ 0.37
TMEM88Q6PEY1 NTF6A-201ENST00000591175 560 ntBASIC17.35■□□□□ 0.37
TMEM88Q6PEY1 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
TMEM88Q6PEY1 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC17.35■□□□□ 0.37
TMEM88Q6PEY1 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC17.35■□□□□ 0.37
TMEM88Q6PEY1 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM88Q6PEY1 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM88Q6PEY1 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC17.35■□□□□ 0.37
TMEM88Q6PEY1 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
TMEM88Q6PEY1 LETM1P2-201ENST00000597330 2178 ntBASIC17.35■□□□□ 0.37
TMEM88Q6PEY1 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM88Q6PEY1 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM88Q6PEY1 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC17.34■□□□□ 0.37
TMEM88Q6PEY1 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
TMEM88Q6PEY1 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM88Q6PEY1 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC17.34■□□□□ 0.37
TMEM88Q6PEY1 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC17.34■□□□□ 0.37
TMEM88Q6PEY1 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM88Q6PEY1 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC17.34■□□□□ 0.37
TMEM88Q6PEY1 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM88Q6PEY1 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC17.34■□□□□ 0.37
TMEM88Q6PEY1 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC17.34■□□□□ 0.37
TMEM88Q6PEY1 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC17.34■□□□□ 0.37
TMEM88Q6PEY1 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC17.34■□□□□ 0.37
TMEM88Q6PEY1 SMPD5-203ENST00000639008 1464 ntBASIC17.34■□□□□ 0.37
TMEM88Q6PEY1 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
TMEM88Q6PEY1 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC17.33■□□□□ 0.37
TMEM88Q6PEY1 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TMEM88Q6PEY1 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TMEM88Q6PEY1 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.33■□□□□ 0.37
TMEM88Q6PEY1 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TMEM88Q6PEY1 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
TMEM88Q6PEY1 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TMEM88Q6PEY1 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC17.33■□□□□ 0.36
TMEM88Q6PEY1 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TMEM88Q6PEY1 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TMEM88Q6PEY1 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.33■□□□□ 0.36
TMEM88Q6PEY1 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
TMEM88Q6PEY1 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TMEM88Q6PEY1 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TMEM88Q6PEY1 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
TMEM88Q6PEY1 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TMEM88Q6PEY1 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TMEM88Q6PEY1 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM88Q6PEY1 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM88Q6PEY1 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
TMEM88Q6PEY1 PCDHAC2-203ENST00000615316 3011 ntBASIC17.32■□□□□ 0.36
TMEM88Q6PEY1 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM88Q6PEY1 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM88Q6PEY1 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM88Q6PEY1 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC17.32■□□□□ 0.36
TMEM88Q6PEY1 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM88Q6PEY1 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC17.32■□□□□ 0.36
TMEM88Q6PEY1 AC007029.1-201ENST00000604183 313 ntBASIC17.32■□□□□ 0.36
TMEM88Q6PEY1 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
TMEM88Q6PEY1 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.32■□□□□ 0.36
TMEM88Q6PEY1 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
TMEM88Q6PEY1 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM88Q6PEY1 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
TMEM88Q6PEY1 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM88Q6PEY1 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.32■□□□□ 0.36
TMEM88Q6PEY1 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC17.32■□□□□ 0.36
TMEM88Q6PEY1 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM88Q6PEY1 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM88Q6PEY1 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM88Q6PEY1 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM88Q6PEY1 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
TMEM88Q6PEY1 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
TMEM88Q6PEY1 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.31■□□□□ 0.36
TMEM88Q6PEY1 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
TMEM88Q6PEY1 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM88Q6PEY1 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM88Q6PEY1 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.31■□□□□ 0.36
TMEM88Q6PEY1 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.31■□□□□ 0.36
TMEM88Q6PEY1 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM88Q6PEY1 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM88Q6PEY1 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM88Q6PEY1 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC17.31■□□□□ 0.36
TMEM88Q6PEY1 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TMEM88Q6PEY1 U85056.1-201ENST00000616429 682 ntBASIC17.31■□□□□ 0.36
TMEM88Q6PEY1 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
TMEM88Q6PEY1 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM88Q6PEY1 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM88Q6PEY1 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms