Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 FBXW4P1-201ENST00000426721 2239 ntBASIC21.47■■□□□ 1.03
ZNF549Q6P9A3 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
ZNF549Q6P9A3 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
ZNF549Q6P9A3 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ZNF549Q6P9A3 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.46■■□□□ 1.03
ZNF549Q6P9A3 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
ZNF549Q6P9A3 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
ZNF549Q6P9A3 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
ZNF549Q6P9A3 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC21.46■■□□□ 1.03
ZNF549Q6P9A3 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.46■■□□□ 1.03
ZNF549Q6P9A3 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
ZNF549Q6P9A3 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.46■■□□□ 1.03
ZNF549Q6P9A3 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC21.46■■□□□ 1.03
ZNF549Q6P9A3 AC010542.4-201ENST00000563151 1910 ntBASIC21.46■■□□□ 1.03
ZNF549Q6P9A3 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ZNF549Q6P9A3 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.45■■□□□ 1.02
ZNF549Q6P9A3 FAM99A-202ENST00000538190 1989 ntBASIC21.45■■□□□ 1.02
ZNF549Q6P9A3 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ZNF549Q6P9A3 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
ZNF549Q6P9A3 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.45■■□□□ 1.02
ZNF549Q6P9A3 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ZNF549Q6P9A3 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
ZNF549Q6P9A3 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
ZNF549Q6P9A3 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.45■■□□□ 1.02
ZNF549Q6P9A3 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
ZNF549Q6P9A3 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ZNF549Q6P9A3 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ZNF549Q6P9A3 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ZNF549Q6P9A3 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ZNF549Q6P9A3 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.44■■□□□ 1.02
ZNF549Q6P9A3 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
ZNF549Q6P9A3 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ZNF549Q6P9A3 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
ZNF549Q6P9A3 AC010141.3-201ENST00000456659 717 ntBASIC21.44■■□□□ 1.02
ZNF549Q6P9A3 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC21.44■■□□□ 1.02
ZNF549Q6P9A3 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.44■■□□□ 1.02
ZNF549Q6P9A3 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC21.44■■□□□ 1.02
ZNF549Q6P9A3 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.44■■□□□ 1.02
ZNF549Q6P9A3 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
ZNF549Q6P9A3 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
ZNF549Q6P9A3 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
ZNF549Q6P9A3 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
ZNF549Q6P9A3 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
ZNF549Q6P9A3 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ZNF549Q6P9A3 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.43■■□□□ 1.02
ZNF549Q6P9A3 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
ZNF549Q6P9A3 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.43■■□□□ 1.02
ZNF549Q6P9A3 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.43■■□□□ 1.02
ZNF549Q6P9A3 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ZNF549Q6P9A3 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
ZNF549Q6P9A3 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
ZNF549Q6P9A3 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ZNF549Q6P9A3 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ZNF549Q6P9A3 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
ZNF549Q6P9A3 AC024257.2-201ENST00000549699 147 ntBASIC21.43■■□□□ 1.02
ZNF549Q6P9A3 MIR4767-201ENST00000582827 78 ntBASIC21.43■■□□□ 1.02
ZNF549Q6P9A3 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ZNF549Q6P9A3 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ZNF549Q6P9A3 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ZNF549Q6P9A3 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
ZNF549Q6P9A3 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
ZNF549Q6P9A3 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ZNF549Q6P9A3 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
ZNF549Q6P9A3 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
ZNF549Q6P9A3 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
ZNF549Q6P9A3 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
ZNF549Q6P9A3 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.42■■□□□ 1.02
ZNF549Q6P9A3 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.42■■□□□ 1.02
ZNF549Q6P9A3 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
ZNF549Q6P9A3 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.42■■□□□ 1.02
ZNF549Q6P9A3 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
ZNF549Q6P9A3 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.41■■□□□ 1.02
ZNF549Q6P9A3 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
ZNF549Q6P9A3 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
ZNF549Q6P9A3 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
ZNF549Q6P9A3 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
ZNF549Q6P9A3 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.41■■□□□ 1.02
ZNF549Q6P9A3 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
ZNF549Q6P9A3 OR7E47P-201ENST00000546390 1422 ntBASIC21.41■■□□□ 1.02
ZNF549Q6P9A3 AC008406.3-201ENST00000620001 1374 ntBASIC21.41■■□□□ 1.02
ZNF549Q6P9A3 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.41■■□□□ 1.02
ZNF549Q6P9A3 PEMT-206ENST00000435340 960 ntTSL 5 BASIC21.41■■□□□ 1.02
ZNF549Q6P9A3 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC21.41■■□□□ 1.02
ZNF549Q6P9A3 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.41■■□□□ 1.02
ZNF549Q6P9A3 AL136162.1-201ENST00000607711 1078 ntBASIC21.41■■□□□ 1.02
ZNF549Q6P9A3 AC007375.3-201ENST00000600936 2314 ntBASIC21.41■■□□□ 1.02
ZNF549Q6P9A3 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.41■■□□□ 1.02
ZNF549Q6P9A3 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.4■■□□□ 1.02
ZNF549Q6P9A3 OXCT2P1-201ENST00000447263 1535 ntBASIC21.4■■□□□ 1.02
ZNF549Q6P9A3 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.4■■□□□ 1.02
ZNF549Q6P9A3 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ZNF549Q6P9A3 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
ZNF549Q6P9A3 AP005435.1-201ENST00000529293 1178 ntBASIC21.4■■□□□ 1.02
ZNF549Q6P9A3 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
ZNF549Q6P9A3 AC087239.1-201ENST00000622671 572 ntBASIC21.4■■□□□ 1.02
ZNF549Q6P9A3 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ZNF549Q6P9A3 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
ZNF549Q6P9A3 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ZNF549Q6P9A3 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
ZNF549Q6P9A3 AC026471.6-201ENST00000622954 1905 ntBASIC21.39■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms