Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.67■□□□□ 0.58
ATPAF1Q5TC12 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC18.66■□□□□ 0.58
ATPAF1Q5TC12 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
ATPAF1Q5TC12 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATPAF1Q5TC12 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ATPAF1Q5TC12 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC18.66■□□□□ 0.58
ATPAF1Q5TC12 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATPAF1Q5TC12 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.65■□□□□ 0.58
ATPAF1Q5TC12 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
ATPAF1Q5TC12 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATPAF1Q5TC12 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
ATPAF1Q5TC12 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
ATPAF1Q5TC12 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC18.65■□□□□ 0.58
ATPAF1Q5TC12 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC18.65■□□□□ 0.58
ATPAF1Q5TC12 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC18.65■□□□□ 0.58
ATPAF1Q5TC12 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.65■□□□□ 0.58
ATPAF1Q5TC12 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATPAF1Q5TC12 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ATPAF1Q5TC12 AC008406.3-201ENST00000620001 1374 ntBASIC18.65■□□□□ 0.58
ATPAF1Q5TC12 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATPAF1Q5TC12 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATPAF1Q5TC12 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATPAF1Q5TC12 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
ATPAF1Q5TC12 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
ATPAF1Q5TC12 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
ATPAF1Q5TC12 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
ATPAF1Q5TC12 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.64■□□□□ 0.58
ATPAF1Q5TC12 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATPAF1Q5TC12 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATPAF1Q5TC12 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
ATPAF1Q5TC12 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
ATPAF1Q5TC12 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC18.64■□□□□ 0.57
ATPAF1Q5TC12 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATPAF1Q5TC12 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATPAF1Q5TC12 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATPAF1Q5TC12 AL136116.3-201ENST00000402907 1138 ntBASIC18.64■□□□□ 0.57
ATPAF1Q5TC12 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ATPAF1Q5TC12 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC18.64■□□□□ 0.57
ATPAF1Q5TC12 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATPAF1Q5TC12 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ATPAF1Q5TC12 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ATPAF1Q5TC12 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
ATPAF1Q5TC12 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ATPAF1Q5TC12 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATPAF1Q5TC12 AL353803.4-201ENST00000565882 1934 ntBASIC18.63■□□□□ 0.57
ATPAF1Q5TC12 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ATPAF1Q5TC12 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ATPAF1Q5TC12 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATPAF1Q5TC12 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC18.63■□□□□ 0.57
ATPAF1Q5TC12 DUX4L19-201ENST00000557448 1267 ntBASIC18.63■□□□□ 0.57
ATPAF1Q5TC12 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATPAF1Q5TC12 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC18.63■□□□□ 0.57
ATPAF1Q5TC12 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
ATPAF1Q5TC12 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATPAF1Q5TC12 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATPAF1Q5TC12 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATPAF1Q5TC12 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATPAF1Q5TC12 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.62■□□□□ 0.57
ATPAF1Q5TC12 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC18.62■□□□□ 0.57
ATPAF1Q5TC12 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATPAF1Q5TC12 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATPAF1Q5TC12 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATPAF1Q5TC12 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATPAF1Q5TC12 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATPAF1Q5TC12 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ATPAF1Q5TC12 PEMT-206ENST00000435340 960 ntTSL 5 BASIC18.62■□□□□ 0.57
ATPAF1Q5TC12 AC099791.2-201ENST00000605725 427 ntBASIC18.62■□□□□ 0.57
ATPAF1Q5TC12 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC18.62■□□□□ 0.57
ATPAF1Q5TC12 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC18.62■□□□□ 0.57
ATPAF1Q5TC12 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
ATPAF1Q5TC12 AC073130.3-201ENST00000624389 2278 ntBASIC18.62■□□□□ 0.57
ATPAF1Q5TC12 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
ATPAF1Q5TC12 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATPAF1Q5TC12 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
ATPAF1Q5TC12 FAM99A-202ENST00000538190 1989 ntBASIC18.61■□□□□ 0.57
ATPAF1Q5TC12 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC18.61■□□□□ 0.57
ATPAF1Q5TC12 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATPAF1Q5TC12 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
ATPAF1Q5TC12 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATPAF1Q5TC12 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
ATPAF1Q5TC12 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC18.61■□□□□ 0.57
ATPAF1Q5TC12 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ATPAF1Q5TC12 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC18.61■□□□□ 0.57
ATPAF1Q5TC12 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.61■□□□□ 0.57
ATPAF1Q5TC12 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATPAF1Q5TC12 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
ATPAF1Q5TC12 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ATPAF1Q5TC12 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ATPAF1Q5TC12 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC18.6■□□□□ 0.57
ATPAF1Q5TC12 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATPAF1Q5TC12 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATPAF1Q5TC12 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ATPAF1Q5TC12 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATPAF1Q5TC12 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.6■□□□□ 0.57
ATPAF1Q5TC12 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATPAF1Q5TC12 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
ATPAF1Q5TC12 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC18.6■□□□□ 0.57
ATPAF1Q5TC12 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATPAF1Q5TC12 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ATPAF1Q5TC12 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms