Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.81■■□□□ 1.08
KHDC1Q4VXA5 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
KHDC1Q4VXA5 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
KHDC1Q4VXA5 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.81■■□□□ 1.08
KHDC1Q4VXA5 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
KHDC1Q4VXA5 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC21.81■■□□□ 1.08
KHDC1Q4VXA5 BX842568.3-201ENST00000418104 571 ntBASIC21.81■■□□□ 1.08
KHDC1Q4VXA5 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
KHDC1Q4VXA5 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
KHDC1Q4VXA5 AC142381.2-201ENST00000566120 298 ntBASIC21.81■■□□□ 1.08
KHDC1Q4VXA5 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.81■■□□□ 1.08
KHDC1Q4VXA5 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
KHDC1Q4VXA5 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
KHDC1Q4VXA5 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
KHDC1Q4VXA5 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.81■■□□□ 1.08
KHDC1Q4VXA5 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
KHDC1Q4VXA5 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.81■■□□□ 1.08
KHDC1Q4VXA5 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.8■■□□□ 1.08
KHDC1Q4VXA5 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.8■■□□□ 1.08
KHDC1Q4VXA5 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
KHDC1Q4VXA5 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
KHDC1Q4VXA5 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
KHDC1Q4VXA5 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
KHDC1Q4VXA5 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
KHDC1Q4VXA5 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
KHDC1Q4VXA5 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
KHDC1Q4VXA5 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.8■■□□□ 1.08
KHDC1Q4VXA5 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
KHDC1Q4VXA5 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.8■■□□□ 1.08
KHDC1Q4VXA5 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
KHDC1Q4VXA5 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
KHDC1Q4VXA5 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
KHDC1Q4VXA5 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.79■■□□□ 1.08
KHDC1Q4VXA5 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
KHDC1Q4VXA5 AC099791.1-201ENST00000416440 715 ntBASIC21.79■■□□□ 1.08
KHDC1Q4VXA5 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC21.79■■□□□ 1.08
KHDC1Q4VXA5 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC21.79■■□□□ 1.08
KHDC1Q4VXA5 AC233992.3-201ENST00000607491 485 ntBASIC21.79■■□□□ 1.08
KHDC1Q4VXA5 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
KHDC1Q4VXA5 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
KHDC1Q4VXA5 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
KHDC1Q4VXA5 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
KHDC1Q4VXA5 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.79■■□□□ 1.08
KHDC1Q4VXA5 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
KHDC1Q4VXA5 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.78■■□□□ 1.08
KHDC1Q4VXA5 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.78■■□□□ 1.08
KHDC1Q4VXA5 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
KHDC1Q4VXA5 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
KHDC1Q4VXA5 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
KHDC1Q4VXA5 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.78■■□□□ 1.08
KHDC1Q4VXA5 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
KHDC1Q4VXA5 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
KHDC1Q4VXA5 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
KHDC1Q4VXA5 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
KHDC1Q4VXA5 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
KHDC1Q4VXA5 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
KHDC1Q4VXA5 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.77■■□□□ 1.08
KHDC1Q4VXA5 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
KHDC1Q4VXA5 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
KHDC1Q4VXA5 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
KHDC1Q4VXA5 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
KHDC1Q4VXA5 AC027682.1-201ENST00000562846 899 ntBASIC21.77■■□□□ 1.08
KHDC1Q4VXA5 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
KHDC1Q4VXA5 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.77■■□□□ 1.08
KHDC1Q4VXA5 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
KHDC1Q4VXA5 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.07
KHDC1Q4VXA5 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
KHDC1Q4VXA5 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
KHDC1Q4VXA5 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
KHDC1Q4VXA5 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC21.76■■□□□ 1.07
KHDC1Q4VXA5 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
KHDC1Q4VXA5 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
KHDC1Q4VXA5 AC091305.1-201ENST00000479476 895 ntBASIC21.76■■□□□ 1.07
KHDC1Q4VXA5 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
KHDC1Q4VXA5 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
KHDC1Q4VXA5 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.76■■□□□ 1.07
KHDC1Q4VXA5 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
KHDC1Q4VXA5 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
KHDC1Q4VXA5 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
KHDC1Q4VXA5 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.75■■□□□ 1.07
KHDC1Q4VXA5 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
KHDC1Q4VXA5 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
KHDC1Q4VXA5 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
KHDC1Q4VXA5 AC073130.3-201ENST00000624389 2278 ntBASIC21.75■■□□□ 1.07
KHDC1Q4VXA5 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
KHDC1Q4VXA5 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
KHDC1Q4VXA5 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
KHDC1Q4VXA5 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.75■■□□□ 1.07
KHDC1Q4VXA5 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.75■■□□□ 1.07
KHDC1Q4VXA5 CA15P2-201ENST00000611168 834 ntBASIC21.75■■□□□ 1.07
KHDC1Q4VXA5 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.75■■□□□ 1.07
KHDC1Q4VXA5 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
KHDC1Q4VXA5 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
KHDC1Q4VXA5 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
KHDC1Q4VXA5 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
KHDC1Q4VXA5 RASA4CP-201ENST00000424092 1398 ntBASIC21.74■■□□□ 1.07
KHDC1Q4VXA5 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
KHDC1Q4VXA5 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
KHDC1Q4VXA5 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC21.74■■□□□ 1.07
KHDC1Q4VXA5 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms