Protein–RNA interactions for Protein: Q495X7

TRIM60, Tripartite motif-containing protein 60, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60Q495X7 MARS-234ENST00000630571 216 ntTSL 5 BASIC23.93■■□□□ 1.42
TRIM60Q495X7 MARS-235ENST00000630803 183 ntTSL 3 BASIC23.93■■□□□ 1.42
TRIM60Q495X7 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
TRIM60Q495X7 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC23.93■■□□□ 1.42
TRIM60Q495X7 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
TRIM60Q495X7 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC23.93■■□□□ 1.42
TRIM60Q495X7 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC23.92■■□□□ 1.42
TRIM60Q495X7 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
TRIM60Q495X7 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC23.92■■□□□ 1.42
TRIM60Q495X7 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
TRIM60Q495X7 BMP1-204ENST00000397814 836 ntTSL 4 BASIC23.92■■□□□ 1.42
TRIM60Q495X7 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC23.92■■□□□ 1.42
TRIM60Q495X7 CYP2T1P-201ENST00000432607 1285 ntBASIC23.92■■□□□ 1.42
TRIM60Q495X7 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC23.92■■□□□ 1.42
TRIM60Q495X7 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC23.92■■□□□ 1.42
TRIM60Q495X7 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC23.92■■□□□ 1.42
TRIM60Q495X7 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
TRIM60Q495X7 MKRN4P-201ENST00000444706 1521 ntBASIC23.92■■□□□ 1.42
TRIM60Q495X7 DUSP8P3-201ENST00000399571 1760 ntBASIC23.92■■□□□ 1.42
TRIM60Q495X7 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
TRIM60Q495X7 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
TRIM60Q495X7 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
TRIM60Q495X7 AC055733.4-201ENST00000638462 1354 ntBASIC23.91■■□□□ 1.42
TRIM60Q495X7 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC23.91■■□□□ 1.42
TRIM60Q495X7 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
TRIM60Q495X7 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
TRIM60Q495X7 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC23.91■■□□□ 1.42
TRIM60Q495X7 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC23.91■■□□□ 1.42
TRIM60Q495X7 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
TRIM60Q495X7 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
TRIM60Q495X7 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC23.91■■□□□ 1.42
TRIM60Q495X7 AC013268.1-206ENST00000638368 961 ntBASIC23.91■■□□□ 1.42
TRIM60Q495X7 AC112229.1-201ENST00000639295 961 ntBASIC23.91■■□□□ 1.42
TRIM60Q495X7 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
TRIM60Q495X7 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
TRIM60Q495X7 DUSP8P5-201ENST00000422884 1815 ntBASIC23.91■■□□□ 1.42
TRIM60Q495X7 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
TRIM60Q495X7 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.42
TRIM60Q495X7 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
TRIM60Q495X7 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
TRIM60Q495X7 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC23.9■■□□□ 1.42
TRIM60Q495X7 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
TRIM60Q495X7 DUSP5P2-201ENST00000426873 1033 ntBASIC23.9■■□□□ 1.42
TRIM60Q495X7 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC23.9■■□□□ 1.42
TRIM60Q495X7 RARRES2P4-201ENST00000514074 484 ntBASIC23.9■■□□□ 1.42
TRIM60Q495X7 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC23.9■■□□□ 1.42
TRIM60Q495X7 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC23.9■■□□□ 1.42
TRIM60Q495X7 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
TRIM60Q495X7 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
TRIM60Q495X7 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC23.9■■□□□ 1.42
TRIM60Q495X7 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
TRIM60Q495X7 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
TRIM60Q495X7 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC23.89■■□□□ 1.41
TRIM60Q495X7 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC23.89■■□□□ 1.41
TRIM60Q495X7 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC23.89■■□□□ 1.41
TRIM60Q495X7 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC23.89■■□□□ 1.41
TRIM60Q495X7 KRT18P20-201ENST00000548986 1279 ntBASIC23.89■■□□□ 1.41
TRIM60Q495X7 AC138907.5-202ENST00000569484 235 ntBASIC23.89■■□□□ 1.41
TRIM60Q495X7 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC23.89■■□□□ 1.41
TRIM60Q495X7 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC23.89■■□□□ 1.41
TRIM60Q495X7 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.41
TRIM60Q495X7 AC068338.2-201ENST00000563278 1430 ntBASIC23.89■■□□□ 1.41
TRIM60Q495X7 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
TRIM60Q495X7 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
TRIM60Q495X7 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.41
TRIM60Q495X7 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
TRIM60Q495X7 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
TRIM60Q495X7 LINC00543-201ENST00000567234 1845 ntBASIC23.89■■□□□ 1.41
TRIM60Q495X7 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC23.88■■□□□ 1.41
TRIM60Q495X7 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
TRIM60Q495X7 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC23.88■■□□□ 1.41
TRIM60Q495X7 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
TRIM60Q495X7 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TRIM60Q495X7 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC23.88■■□□□ 1.41
TRIM60Q495X7 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
TRIM60Q495X7 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
TRIM60Q495X7 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC23.87■■□□□ 1.41
TRIM60Q495X7 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
TRIM60Q495X7 TERF1P5-201ENST00000477545 1207 ntBASIC23.87■■□□□ 1.41
TRIM60Q495X7 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC23.87■■□□□ 1.41
TRIM60Q495X7 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC23.87■■□□□ 1.41
TRIM60Q495X7 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TRIM60Q495X7 MED17-227ENST00000640521 2047 ntTSL 5 BASIC23.87■■□□□ 1.41
TRIM60Q495X7 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TRIM60Q495X7 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC23.87■■□□□ 1.41
TRIM60Q495X7 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
TRIM60Q495X7 AC142381.3-201ENST00000568208 1670 ntBASIC23.86■■□□□ 1.41
TRIM60Q495X7 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
TRIM60Q495X7 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC23.86■■□□□ 1.41
TRIM60Q495X7 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
TRIM60Q495X7 RHEB-204ENST00000472642 900 ntTSL 3 BASIC23.86■■□□□ 1.41
TRIM60Q495X7 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
TRIM60Q495X7 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC23.86■■□□□ 1.41
TRIM60Q495X7 AP006294.2-201ENST00000641667 209 ntBASIC23.86■■□□□ 1.41
TRIM60Q495X7 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
TRIM60Q495X7 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
TRIM60Q495X7 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
TRIM60Q495X7 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
TRIM60Q495X7 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC23.85■■□□□ 1.41
TRIM60Q495X7 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms