Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC15.01□□□□□ -0.01
CKS1BP61024 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CKS1BP61024 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
CKS1BP61024 AC026310.3-201ENST00000625186 2373 ntBASIC15□□□□□ -0.01
CKS1BP61024 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CKS1BP61024 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CKS1BP61024 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CKS1BP61024 EI24-204ENST00000527235 1625 ntTSL 5 BASIC15□□□□□ -0.01
CKS1BP61024 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CKS1BP61024 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC15□□□□□ -0.01
CKS1BP61024 AC120498.9-201ENST00000339021 3867 ntBASIC15□□□□□ -0.01
CKS1BP61024 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
CKS1BP61024 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC15□□□□□ -0.01
CKS1BP61024 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC15□□□□□ -0.01
CKS1BP61024 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC15□□□□□ -0.01
CKS1BP61024 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
CKS1BP61024 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
CKS1BP61024 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
CKS1BP61024 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
CKS1BP61024 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
CKS1BP61024 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC15□□□□□ -0.01
CKS1BP61024 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
CKS1BP61024 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CKS1BP61024 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CKS1BP61024 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CKS1BP61024 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CKS1BP61024 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CKS1BP61024 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC14.99□□□□□ -0.01
CKS1BP61024 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
CKS1BP61024 LONRF2P2-201ENST00000439212 571 ntBASIC14.99□□□□□ -0.01
CKS1BP61024 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CKS1BP61024 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC14.99□□□□□ -0.01
CKS1BP61024 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CKS1BP61024 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CKS1BP61024 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CKS1BP61024 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CKS1BP61024 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CKS1BP61024 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CKS1BP61024 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CKS1BP61024 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CKS1BP61024 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CKS1BP61024 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CKS1BP61024 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CKS1BP61024 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CKS1BP61024 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
CKS1BP61024 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CKS1BP61024 H19-210ENST00000439725 1929 ntTSL 2 BASIC14.98□□□□□ -0.01
CKS1BP61024 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CKS1BP61024 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CKS1BP61024 AC022616.5-201ENST00000518796 181 ntBASIC14.98□□□□□ -0.01
CKS1BP61024 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
CKS1BP61024 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CKS1BP61024 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CKS1BP61024 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CKS1BP61024 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC14.98□□□□□ -0.01
CKS1BP61024 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CKS1BP61024 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CKS1BP61024 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CKS1BP61024 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CKS1BP61024 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CKS1BP61024 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CKS1BP61024 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC14.98□□□□□ -0.01
CKS1BP61024 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC14.98□□□□□ -0.01
CKS1BP61024 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC14.97□□□□□ -0.01
CKS1BP61024 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CKS1BP61024 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CKS1BP61024 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CKS1BP61024 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
CKS1BP61024 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
CKS1BP61024 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CKS1BP61024 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
CKS1BP61024 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC14.97□□□□□ -0.01
CKS1BP61024 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CKS1BP61024 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CKS1BP61024 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CKS1BP61024 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CKS1BP61024 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CKS1BP61024 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC14.97□□□□□ -0.01
CKS1BP61024 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CKS1BP61024 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CKS1BP61024 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CKS1BP61024 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CKS1BP61024 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CKS1BP61024 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC14.97□□□□□ -0.01
CKS1BP61024 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CKS1BP61024 TERT-206ENST00000508104 2486 ntTSL 5 BASIC14.97□□□□□ -0.01
CKS1BP61024 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC14.96□□□□□ -0.01
CKS1BP61024 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
CKS1BP61024 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CKS1BP61024 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CKS1BP61024 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
CKS1BP61024 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CKS1BP61024 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CKS1BP61024 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CKS1BP61024 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC14.96□□□□□ -0.01
CKS1BP61024 AC139795.1-202ENST00000500444 432 ntBASIC14.96□□□□□ -0.01
CKS1BP61024 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC14.96□□□□□ -0.01
CKS1BP61024 GAK-223ENST00000628912 497 ntTSL 5 BASIC14.96□□□□□ -0.01
CKS1BP61024 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CKS1BP61024 ESRRAP2-201ENST00000418437 1549 ntBASIC14.96□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms