Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC17.51■□□□□ 0.39
SPCS3P61009 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SPCS3P61009 AC004687.1-201ENST00000579003 1625 ntBASIC17.5■□□□□ 0.39
SPCS3P61009 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
SPCS3P61009 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SPCS3P61009 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SPCS3P61009 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC17.5■□□□□ 0.39
SPCS3P61009 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SPCS3P61009 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC17.5■□□□□ 0.39
SPCS3P61009 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC17.5■□□□□ 0.39
SPCS3P61009 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
SPCS3P61009 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
SPCS3P61009 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SPCS3P61009 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
SPCS3P61009 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SPCS3P61009 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SPCS3P61009 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC17.5■□□□□ 0.39
SPCS3P61009 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SPCS3P61009 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC17.49■□□□□ 0.39
SPCS3P61009 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
SPCS3P61009 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC17.49■□□□□ 0.39
SPCS3P61009 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC17.49■□□□□ 0.39
SPCS3P61009 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC17.49■□□□□ 0.39
SPCS3P61009 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC17.49■□□□□ 0.39
SPCS3P61009 CLTA-206ENST00000466396 695 ntTSL 2 BASIC17.49■□□□□ 0.39
SPCS3P61009 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SPCS3P61009 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SPCS3P61009 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
SPCS3P61009 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SPCS3P61009 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
SPCS3P61009 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC17.48■□□□□ 0.39
SPCS3P61009 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
SPCS3P61009 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SPCS3P61009 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC17.48■□□□□ 0.39
SPCS3P61009 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SPCS3P61009 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC17.48■□□□□ 0.39
SPCS3P61009 AC073130.3-201ENST00000624389 2278 ntBASIC17.48■□□□□ 0.39
SPCS3P61009 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
SPCS3P61009 NKILA-201ENST00000613231 537 ntTSL 4 BASIC17.48■□□□□ 0.39
SPCS3P61009 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
SPCS3P61009 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SPCS3P61009 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SPCS3P61009 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SPCS3P61009 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SPCS3P61009 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC17.47■□□□□ 0.39
SPCS3P61009 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SPCS3P61009 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
SPCS3P61009 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SPCS3P61009 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC17.47■□□□□ 0.39
SPCS3P61009 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SPCS3P61009 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC17.47■□□□□ 0.39
SPCS3P61009 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC17.47■□□□□ 0.39
SPCS3P61009 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SPCS3P61009 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC17.47■□□□□ 0.39
SPCS3P61009 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SPCS3P61009 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.47■□□□□ 0.39
SPCS3P61009 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC17.47■□□□□ 0.39
SPCS3P61009 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC17.47■□□□□ 0.39
SPCS3P61009 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SPCS3P61009 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SPCS3P61009 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SPCS3P61009 AC009102.2-201ENST00000606772 1639 ntBASIC17.47■□□□□ 0.39
SPCS3P61009 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC17.47■□□□□ 0.39
SPCS3P61009 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC17.47■□□□□ 0.39
SPCS3P61009 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SPCS3P61009 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
SPCS3P61009 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SPCS3P61009 AC244015.2-201ENST00000616358 1861 ntBASIC17.46■□□□□ 0.39
SPCS3P61009 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
SPCS3P61009 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC17.46■□□□□ 0.39
SPCS3P61009 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC17.46■□□□□ 0.39
SPCS3P61009 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SPCS3P61009 GOLGA2P6-201ENST00000340929 2049 ntBASIC17.46■□□□□ 0.39
SPCS3P61009 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SPCS3P61009 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SPCS3P61009 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
SPCS3P61009 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SPCS3P61009 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SPCS3P61009 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
SPCS3P61009 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC17.46■□□□□ 0.38
SPCS3P61009 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
SPCS3P61009 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.38
SPCS3P61009 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SPCS3P61009 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SPCS3P61009 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SPCS3P61009 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
SPCS3P61009 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SPCS3P61009 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC17.45■□□□□ 0.38
SPCS3P61009 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SPCS3P61009 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SPCS3P61009 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SPCS3P61009 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC17.45■□□□□ 0.38
SPCS3P61009 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC17.45■□□□□ 0.38
SPCS3P61009 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC17.45■□□□□ 0.38
SPCS3P61009 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SPCS3P61009 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
SPCS3P61009 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC17.45■□□□□ 0.38
SPCS3P61009 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC17.45■□□□□ 0.38
SPCS3P61009 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SPCS3P61009 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms