Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 MIR4767-201ENST00000582827 78 ntBASIC19.29■□□□□ 0.68
CLRN1P58418 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.29■□□□□ 0.68
CLRN1P58418 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.29■□□□□ 0.68
CLRN1P58418 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLRN1P58418 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.29■□□□□ 0.68
CLRN1P58418 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
CLRN1P58418 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CLRN1P58418 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
CLRN1P58418 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLRN1P58418 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLRN1P58418 AC135279.3-201ENST00000610945 1311 ntBASIC19.28■□□□□ 0.68
CLRN1P58418 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.28■□□□□ 0.68
CLRN1P58418 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLRN1P58418 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLRN1P58418 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLRN1P58418 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLRN1P58418 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLRN1P58418 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CLRN1P58418 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.28■□□□□ 0.68
CLRN1P58418 AC096631.2-201ENST00000436136 790 ntBASIC19.28■□□□□ 0.68
CLRN1P58418 AC024257.2-201ENST00000549699 147 ntBASIC19.28■□□□□ 0.68
CLRN1P58418 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CLRN1P58418 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.28■□□□□ 0.68
CLRN1P58418 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.28■□□□□ 0.68
CLRN1P58418 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.28■□□□□ 0.68
CLRN1P58418 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
CLRN1P58418 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.28■□□□□ 0.68
CLRN1P58418 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLRN1P58418 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLRN1P58418 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.27■□□□□ 0.68
CLRN1P58418 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CLRN1P58418 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CLRN1P58418 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC19.27■□□□□ 0.68
CLRN1P58418 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLRN1P58418 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CLRN1P58418 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CLRN1P58418 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CLRN1P58418 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.27■□□□□ 0.67
CLRN1P58418 LINC00565-201ENST00000562710 2331 ntBASIC19.26■□□□□ 0.67
CLRN1P58418 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLRN1P58418 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLRN1P58418 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CLRN1P58418 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLRN1P58418 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLRN1P58418 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
CLRN1P58418 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLRN1P58418 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLRN1P58418 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CLRN1P58418 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CLRN1P58418 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.26■□□□□ 0.67
CLRN1P58418 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CLRN1P58418 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CLRN1P58418 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLRN1P58418 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
CLRN1P58418 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.26■□□□□ 0.67
CLRN1P58418 OR7E47P-201ENST00000546390 1422 ntBASIC19.25■□□□□ 0.67
CLRN1P58418 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLRN1P58418 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLRN1P58418 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CLRN1P58418 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLRN1P58418 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.25■□□□□ 0.67
CLRN1P58418 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.25■□□□□ 0.67
CLRN1P58418 AP005435.1-201ENST00000529293 1178 ntBASIC19.25■□□□□ 0.67
CLRN1P58418 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC19.25■□□□□ 0.67
CLRN1P58418 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.25■□□□□ 0.67
CLRN1P58418 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLRN1P58418 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.25■□□□□ 0.67
CLRN1P58418 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLRN1P58418 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLRN1P58418 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
CLRN1P58418 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CLRN1P58418 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLRN1P58418 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLRN1P58418 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CLRN1P58418 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.24■□□□□ 0.67
CLRN1P58418 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLRN1P58418 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CLRN1P58418 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
CLRN1P58418 BX842568.3-201ENST00000418104 571 ntBASIC19.24■□□□□ 0.67
CLRN1P58418 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC19.24■□□□□ 0.67
CLRN1P58418 PBX2P1-201ENST00000493219 1291 ntBASIC19.24■□□□□ 0.67
CLRN1P58418 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.24■□□□□ 0.67
CLRN1P58418 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.24■□□□□ 0.67
CLRN1P58418 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.24■□□□□ 0.67
CLRN1P58418 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CLRN1P58418 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CLRN1P58418 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CLRN1P58418 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLRN1P58418 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CLRN1P58418 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CLRN1P58418 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLRN1P58418 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLRN1P58418 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.23■□□□□ 0.67
CLRN1P58418 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CLRN1P58418 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CLRN1P58418 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CLRN1P58418 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLRN1P58418 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLRN1P58418 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLRN1P58418 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms