Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 AC139530.1-201ENST00000575312 1977 ntBASIC20.08■□□□□ 0.81
PSMD4P55036 AC080038.3-201ENST00000623346 1952 ntBASIC20.08■□□□□ 0.81
PSMD4P55036 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
PSMD4P55036 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PSMD4P55036 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PSMD4P55036 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.08■□□□□ 0.81
PSMD4P55036 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
PSMD4P55036 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PSMD4P55036 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PSMD4P55036 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PSMD4P55036 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
PSMD4P55036 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PSMD4P55036 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PSMD4P55036 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PSMD4P55036 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
PSMD4P55036 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PSMD4P55036 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PSMD4P55036 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.07■□□□□ 0.8
PSMD4P55036 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PSMD4P55036 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PSMD4P55036 AC091305.1-201ENST00000479476 895 ntBASIC20.07■□□□□ 0.8
PSMD4P55036 AC079089.2-201ENST00000531211 1277 ntBASIC20.07■□□□□ 0.8
PSMD4P55036 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.07■□□□□ 0.8
PSMD4P55036 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.07■□□□□ 0.8
PSMD4P55036 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PSMD4P55036 RASA4CP-201ENST00000424092 1398 ntBASIC20.07■□□□□ 0.8
PSMD4P55036 OXCT2P1-201ENST00000447263 1535 ntBASIC20.07■□□□□ 0.8
PSMD4P55036 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PSMD4P55036 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PSMD4P55036 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PSMD4P55036 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PSMD4P55036 AC099791.1-201ENST00000416440 715 ntBASIC20.06■□□□□ 0.8
PSMD4P55036 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PSMD4P55036 AP001330.3-201ENST00000520123 633 ntBASIC20.06■□□□□ 0.8
PSMD4P55036 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
PSMD4P55036 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PSMD4P55036 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PSMD4P55036 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PSMD4P55036 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PSMD4P55036 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.06■□□□□ 0.8
PSMD4P55036 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PSMD4P55036 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PSMD4P55036 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.06■□□□□ 0.8
PSMD4P55036 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PSMD4P55036 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.05■□□□□ 0.8
PSMD4P55036 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.05■□□□□ 0.8
PSMD4P55036 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
PSMD4P55036 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.05■□□□□ 0.8
PSMD4P55036 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.05■□□□□ 0.8
PSMD4P55036 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PSMD4P55036 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PSMD4P55036 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PSMD4P55036 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PSMD4P55036 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PSMD4P55036 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.05■□□□□ 0.8
PSMD4P55036 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PSMD4P55036 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
PSMD4P55036 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PSMD4P55036 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
PSMD4P55036 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.04■□□□□ 0.8
PSMD4P55036 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PSMD4P55036 MIR939-201ENST00000401314 82 ntBASIC20.04■□□□□ 0.8
PSMD4P55036 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.04■□□□□ 0.8
PSMD4P55036 IGHV3-19-201ENST00000521488 291 ntBASIC20.04■□□□□ 0.8
PSMD4P55036 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.04■□□□□ 0.8
PSMD4P55036 AF213884.3-201ENST00000563833 479 ntBASIC20.04■□□□□ 0.8
PSMD4P55036 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
PSMD4P55036 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PSMD4P55036 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PSMD4P55036 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PSMD4P55036 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
PSMD4P55036 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
PSMD4P55036 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.04■□□□□ 0.8
PSMD4P55036 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PSMD4P55036 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PSMD4P55036 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PSMD4P55036 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
PSMD4P55036 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PSMD4P55036 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.03■□□□□ 0.8
PSMD4P55036 AC142381.2-201ENST00000566120 298 ntBASIC20.03■□□□□ 0.8
PSMD4P55036 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
PSMD4P55036 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.03■□□□□ 0.8
PSMD4P55036 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
PSMD4P55036 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
PSMD4P55036 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.03■□□□□ 0.8
PSMD4P55036 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.03■□□□□ 0.8
PSMD4P55036 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PSMD4P55036 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.03■□□□□ 0.8
PSMD4P55036 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.03■□□□□ 0.8
PSMD4P55036 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PSMD4P55036 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.03■□□□□ 0.8
PSMD4P55036 EP400NL-214ENST00000641289 2402 ntBASIC20.03■□□□□ 0.8
PSMD4P55036 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PSMD4P55036 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PSMD4P55036 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
PSMD4P55036 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PSMD4P55036 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
PSMD4P55036 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
PSMD4P55036 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PSMD4P55036 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms