Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC24.14■■□□□ 1.45
CPT1AP50416 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.45
CPT1AP50416 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC24.14■■□□□ 1.45
CPT1AP50416 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC24.14■■□□□ 1.45
CPT1AP50416 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC24.14■■□□□ 1.45
CPT1AP50416 TFG-210ENST00000620299 1289 ntTSL 5 BASIC24.14■■□□□ 1.45
CPT1AP50416 MYCNOS-205ENST00000641950 531 ntBASIC24.14■■□□□ 1.45
CPT1AP50416 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.45
CPT1AP50416 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
CPT1AP50416 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
CPT1AP50416 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC24.13■■□□□ 1.45
CPT1AP50416 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
CPT1AP50416 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
CPT1AP50416 SERP1-208ENST00000491660 830 ntTSL 2 BASIC24.13■■□□□ 1.45
CPT1AP50416 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC24.13■■□□□ 1.45
CPT1AP50416 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
CPT1AP50416 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC24.13■■□□□ 1.45
CPT1AP50416 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
CPT1AP50416 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CPT1AP50416 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC24.12■■□□□ 1.45
CPT1AP50416 DUSP8P5-201ENST00000422884 1815 ntBASIC24.12■■□□□ 1.45
CPT1AP50416 FXN-202ENST00000396364 980 ntTSL 5 BASIC24.12■■□□□ 1.45
CPT1AP50416 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC24.12■■□□□ 1.45
CPT1AP50416 AC005181.1-201ENST00000604782 1256 ntBASIC24.12■■□□□ 1.45
CPT1AP50416 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC24.12■■□□□ 1.45
CPT1AP50416 AL050303.2-201ENST00000619798 666 ntBASIC24.12■■□□□ 1.45
CPT1AP50416 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC24.12■■□□□ 1.45
CPT1AP50416 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC24.11■■□□□ 1.45
CPT1AP50416 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC24.11■■□□□ 1.45
CPT1AP50416 AC083906.2-201ENST00000511578 360 ntBASIC24.11■■□□□ 1.45
CPT1AP50416 BRI3-207ENST00000539286 699 ntTSL 2 BASIC24.11■■□□□ 1.45
CPT1AP50416 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC24.11■■□□□ 1.45
CPT1AP50416 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC24.11■■□□□ 1.45
CPT1AP50416 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC24.11■■□□□ 1.45
CPT1AP50416 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
CPT1AP50416 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CPT1AP50416 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC24.11■■□□□ 1.45
CPT1AP50416 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CPT1AP50416 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CPT1AP50416 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CPT1AP50416 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC24.1■■□□□ 1.45
CPT1AP50416 AC142086.2-201ENST00000569753 217 ntBASIC24.1■■□□□ 1.45
CPT1AP50416 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC24.1■■□□□ 1.45
CPT1AP50416 PARP1-210ENST00000629232 477 ntTSL 5 BASIC24.1■■□□□ 1.45
CPT1AP50416 AP004607.7-201ENST00000527152 1677 ntBASIC24.1■■□□□ 1.45
CPT1AP50416 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CPT1AP50416 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CPT1AP50416 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
CPT1AP50416 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC24.09■■□□□ 1.45
CPT1AP50416 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC24.09■■□□□ 1.45
CPT1AP50416 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC24.09■■□□□ 1.45
CPT1AP50416 ABHD17AP1-201ENST00000358206 933 ntBASIC24.09■■□□□ 1.45
CPT1AP50416 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
CPT1AP50416 TSPY6P-201ENST00000448518 926 ntBASIC24.09■■□□□ 1.45
CPT1AP50416 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
CPT1AP50416 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CPT1AP50416 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC24.09■■□□□ 1.45
CPT1AP50416 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CPT1AP50416 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CPT1AP50416 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
CPT1AP50416 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC24.08■■□□□ 1.45
CPT1AP50416 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
CPT1AP50416 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
CPT1AP50416 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC24.08■■□□□ 1.45
CPT1AP50416 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC24.08■■□□□ 1.45
CPT1AP50416 GAMT-205ENST00000640762 751 ntTSL 5 BASIC24.08■■□□□ 1.45
CPT1AP50416 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
CPT1AP50416 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
CPT1AP50416 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CPT1AP50416 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
CPT1AP50416 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
CPT1AP50416 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC24.07■■□□□ 1.44
CPT1AP50416 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC24.07■■□□□ 1.44
CPT1AP50416 AC010141.2-201ENST00000452426 721 ntBASIC24.07■■□□□ 1.44
CPT1AP50416 KRT18P20-201ENST00000548986 1279 ntBASIC24.07■■□□□ 1.44
CPT1AP50416 AC138907.5-202ENST00000569484 235 ntBASIC24.07■■□□□ 1.44
CPT1AP50416 OR7E47P-201ENST00000546390 1422 ntBASIC24.07■■□□□ 1.44
CPT1AP50416 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC24.07■■□□□ 1.44
CPT1AP50416 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CPT1AP50416 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
CPT1AP50416 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CPT1AP50416 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
CPT1AP50416 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CPT1AP50416 OAS3-207ENST00000551007 998 ntTSL 2 BASIC24.06■■□□□ 1.44
CPT1AP50416 SLC7A5P2-201ENST00000553010 536 ntBASIC24.06■■□□□ 1.44
CPT1AP50416 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC24.06■■□□□ 1.44
CPT1AP50416 AL034346.1-201ENST00000568244 1277 ntBASIC24.06■■□□□ 1.44
CPT1AP50416 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC24.06■■□□□ 1.44
CPT1AP50416 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
CPT1AP50416 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CPT1AP50416 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
CPT1AP50416 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CPT1AP50416 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC24.05■■□□□ 1.44
CPT1AP50416 APTR-205ENST00000447009 902 ntTSL 2 BASIC24.05■■□□□ 1.44
CPT1AP50416 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC24.05■■□□□ 1.44
CPT1AP50416 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC24.05■■□□□ 1.44
CPT1AP50416 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CPT1AP50416 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
CPT1AP50416 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
CPT1AP50416 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms