Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 AL139125.2-201ENST00000623134 1869 ntBASIC26.91■■□□□ 1.9
PDE6BP35913 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC26.91■■□□□ 1.9
PDE6BP35913 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
PDE6BP35913 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
PDE6BP35913 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC26.91■■□□□ 1.9
PDE6BP35913 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
PDE6BP35913 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC26.91■■□□□ 1.9
PDE6BP35913 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
PDE6BP35913 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
PDE6BP35913 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC26.91■■□□□ 1.9
PDE6BP35913 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC26.91■■□□□ 1.9
PDE6BP35913 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC26.91■■□□□ 1.9
PDE6BP35913 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
PDE6BP35913 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC26.9■■□□□ 1.9
PDE6BP35913 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
PDE6BP35913 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
PDE6BP35913 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC26.9■■□□□ 1.9
PDE6BP35913 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC26.9■■□□□ 1.9
PDE6BP35913 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC26.9■■□□□ 1.9
PDE6BP35913 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
PDE6BP35913 AC013268.1-206ENST00000638368 961 ntBASIC26.9■■□□□ 1.9
PDE6BP35913 AC112229.1-201ENST00000639295 961 ntBASIC26.9■■□□□ 1.9
PDE6BP35913 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
PDE6BP35913 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
PDE6BP35913 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC26.89■■□□□ 1.9
PDE6BP35913 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC26.89■■□□□ 1.9
PDE6BP35913 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
PDE6BP35913 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC26.89■■□□□ 1.89
PDE6BP35913 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
PDE6BP35913 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
PDE6BP35913 DUSP8P5-201ENST00000422884 1815 ntBASIC26.88■■□□□ 1.89
PDE6BP35913 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC26.88■■□□□ 1.89
PDE6BP35913 AC004812.2-201ENST00000611079 2094 ntBASIC26.88■■□□□ 1.89
PDE6BP35913 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC26.88■■□□□ 1.89
PDE6BP35913 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC26.88■■□□□ 1.89
PDE6BP35913 KRT18P29-201ENST00000397031 1267 ntBASIC26.88■■□□□ 1.89
PDE6BP35913 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC26.88■■□□□ 1.89
PDE6BP35913 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC26.88■■□□□ 1.89
PDE6BP35913 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC26.88■■□□□ 1.89
PDE6BP35913 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC26.88■■□□□ 1.89
PDE6BP35913 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
PDE6BP35913 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
PDE6BP35913 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC26.88■■□□□ 1.89
PDE6BP35913 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC26.88■■□□□ 1.89
PDE6BP35913 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC26.88■■□□□ 1.89
PDE6BP35913 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
PDE6BP35913 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC26.87■■□□□ 1.89
PDE6BP35913 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
PDE6BP35913 FXN-202ENST00000396364 980 ntTSL 5 BASIC26.87■■□□□ 1.89
PDE6BP35913 RNA5SP413-201ENST00000516373 109 ntBASIC26.87■■□□□ 1.89
PDE6BP35913 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC26.87■■□□□ 1.89
PDE6BP35913 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC26.87■■□□□ 1.89
PDE6BP35913 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC26.87■■□□□ 1.89
PDE6BP35913 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC26.87■■□□□ 1.89
PDE6BP35913 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
PDE6BP35913 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
PDE6BP35913 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
PDE6BP35913 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC26.86■■□□□ 1.89
PDE6BP35913 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
PDE6BP35913 MIPEPP3-201ENST00000412105 444 ntBASIC26.86■■□□□ 1.89
PDE6BP35913 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
PDE6BP35913 SLC7A5P1-201ENST00000568957 537 ntBASIC26.86■■□□□ 1.89
PDE6BP35913 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
PDE6BP35913 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC26.86■■□□□ 1.89
PDE6BP35913 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
PDE6BP35913 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
PDE6BP35913 BMP1-204ENST00000397814 836 ntTSL 4 BASIC26.85■■□□□ 1.89
PDE6BP35913 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC26.85■■□□□ 1.89
PDE6BP35913 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC26.85■■□□□ 1.89
PDE6BP35913 TERF1P5-201ENST00000477545 1207 ntBASIC26.85■■□□□ 1.89
PDE6BP35913 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
PDE6BP35913 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC26.85■■□□□ 1.89
PDE6BP35913 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC26.84■■□□□ 1.89
PDE6BP35913 LINC01124-201ENST00000409786 2117 ntBASIC26.84■■□□□ 1.89
PDE6BP35913 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC26.84■■□□□ 1.89
PDE6BP35913 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC26.84■■□□□ 1.89
PDE6BP35913 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
PDE6BP35913 BET1L-204ENST00000410108 637 ntTSL 3 BASIC26.84■■□□□ 1.89
PDE6BP35913 UQCRFS1P1-201ENST00000435169 820 ntBASIC26.84■■□□□ 1.89
PDE6BP35913 MARS-234ENST00000630571 216 ntTSL 5 BASIC26.84■■□□□ 1.89
PDE6BP35913 MARS-235ENST00000630803 183 ntTSL 3 BASIC26.84■■□□□ 1.89
PDE6BP35913 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC26.84■■□□□ 1.89
PDE6BP35913 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC26.84■■□□□ 1.89
PDE6BP35913 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
PDE6BP35913 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC26.84■■□□□ 1.89
PDE6BP35913 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC26.83■■□□□ 1.89
PDE6BP35913 AC068338.2-201ENST00000563278 1430 ntBASIC26.83■■□□□ 1.89
PDE6BP35913 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC26.83■■□□□ 1.89
PDE6BP35913 PPP1R14BP2-201ENST00000426284 444 ntBASIC26.83■■□□□ 1.89
PDE6BP35913 MKRN4P-201ENST00000444706 1521 ntBASIC26.83■■□□□ 1.89
PDE6BP35913 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC26.83■■□□□ 1.89
PDE6BP35913 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
PDE6BP35913 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC26.82■■□□□ 1.88
PDE6BP35913 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
PDE6BP35913 CYP2T1P-201ENST00000432607 1285 ntBASIC26.82■■□□□ 1.88
PDE6BP35913 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC26.82■■□□□ 1.88
PDE6BP35913 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
PDE6BP35913 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC26.82■■□□□ 1.88
PDE6BP35913 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC26.82■■□□□ 1.88
PDE6BP35913 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC26.82■■□□□ 1.88
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms