Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC26.34■■□□□ 1.81
COL4A5P29400 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC26.34■■□□□ 1.81
COL4A5P29400 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
COL4A5P29400 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
COL4A5P29400 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC26.34■■□□□ 1.81
COL4A5P29400 PHB2-213ENST00000546111 858 ntTSL 2 BASIC26.34■■□□□ 1.81
COL4A5P29400 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC26.34■■□□□ 1.81
COL4A5P29400 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC26.34■■□□□ 1.81
COL4A5P29400 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
COL4A5P29400 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC26.33■■□□□ 1.81
COL4A5P29400 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.81
COL4A5P29400 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC26.33■■□□□ 1.81
COL4A5P29400 AC138907.5-202ENST00000569484 235 ntBASIC26.33■■□□□ 1.81
COL4A5P29400 AC083880.1-201ENST00000608266 535 ntBASIC26.33■■□□□ 1.81
COL4A5P29400 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC26.33■■□□□ 1.81
COL4A5P29400 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
COL4A5P29400 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC26.33■■□□□ 1.81
COL4A5P29400 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
COL4A5P29400 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC26.33■■□□□ 1.8
COL4A5P29400 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
COL4A5P29400 AC068338.2-201ENST00000563278 1430 ntBASIC26.32■■□□□ 1.8
COL4A5P29400 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC26.32■■□□□ 1.8
COL4A5P29400 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC26.32■■□□□ 1.8
COL4A5P29400 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC26.32■■□□□ 1.8
COL4A5P29400 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
COL4A5P29400 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
COL4A5P29400 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC26.31■■□□□ 1.8
COL4A5P29400 PPP1R14BP2-201ENST00000426284 444 ntBASIC26.31■■□□□ 1.8
COL4A5P29400 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC26.31■■□□□ 1.8
COL4A5P29400 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
COL4A5P29400 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
COL4A5P29400 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC26.31■■□□□ 1.8
COL4A5P29400 MIPEPP3-201ENST00000412105 444 ntBASIC26.31■■□□□ 1.8
COL4A5P29400 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
COL4A5P29400 RARRES2P4-201ENST00000514074 484 ntBASIC26.31■■□□□ 1.8
COL4A5P29400 PLLP-204ENST00000569059 665 ntTSL 3 BASIC26.31■■□□□ 1.8
COL4A5P29400 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
COL4A5P29400 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC26.3■■□□□ 1.8
COL4A5P29400 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
COL4A5P29400 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
COL4A5P29400 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
COL4A5P29400 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
COL4A5P29400 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC26.3■■□□□ 1.8
COL4A5P29400 AC093787.1-201ENST00000450396 207 ntBASIC26.3■■□□□ 1.8
COL4A5P29400 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
COL4A5P29400 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
COL4A5P29400 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC26.3■■□□□ 1.8
COL4A5P29400 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
COL4A5P29400 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
COL4A5P29400 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
COL4A5P29400 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC26.29■■□□□ 1.8
COL4A5P29400 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
COL4A5P29400 AC013268.1-206ENST00000638368 961 ntBASIC26.29■■□□□ 1.8
COL4A5P29400 AC112229.1-201ENST00000639295 961 ntBASIC26.29■■□□□ 1.8
COL4A5P29400 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
COL4A5P29400 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC26.29■■□□□ 1.8
COL4A5P29400 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
COL4A5P29400 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC26.29■■□□□ 1.8
COL4A5P29400 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC26.29■■□□□ 1.8
COL4A5P29400 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC26.29■■□□□ 1.8
COL4A5P29400 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
COL4A5P29400 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
COL4A5P29400 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC26.28■■□□□ 1.8
COL4A5P29400 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
COL4A5P29400 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
COL4A5P29400 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC26.28■■□□□ 1.8
COL4A5P29400 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
COL4A5P29400 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
COL4A5P29400 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC26.28■■□□□ 1.8
COL4A5P29400 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
COL4A5P29400 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
COL4A5P29400 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
COL4A5P29400 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
COL4A5P29400 KRT18P29-201ENST00000397031 1267 ntBASIC26.27■■□□□ 1.8
COL4A5P29400 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
COL4A5P29400 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
COL4A5P29400 ARL16-209ENST00000573715 763 ntTSL 3 BASIC26.27■■□□□ 1.8
COL4A5P29400 ARL16-211ENST00000576135 694 ntTSL 3 BASIC26.27■■□□□ 1.8
COL4A5P29400 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC26.27■■□□□ 1.8
COL4A5P29400 MKRN4P-201ENST00000444706 1521 ntBASIC26.26■■□□□ 1.8
COL4A5P29400 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
COL4A5P29400 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
COL4A5P29400 KRT18P20-201ENST00000548986 1279 ntBASIC26.26■■□□□ 1.79
COL4A5P29400 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
COL4A5P29400 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
COL4A5P29400 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC26.26■■□□□ 1.79
COL4A5P29400 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
COL4A5P29400 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
COL4A5P29400 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC26.25■■□□□ 1.79
COL4A5P29400 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC26.25■■□□□ 1.79
COL4A5P29400 MIR4758-201ENST00000577688 71 ntBASIC26.25■■□□□ 1.79
COL4A5P29400 AL139125.2-201ENST00000623134 1869 ntBASIC26.25■■□□□ 1.79
COL4A5P29400 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
COL4A5P29400 ABCB10P4-201ENST00000566803 2184 ntBASIC26.25■■□□□ 1.79
COL4A5P29400 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
COL4A5P29400 NAA20-201ENST00000310450 920 ntTSL 2 BASIC26.25■■□□□ 1.79
COL4A5P29400 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC26.25■■□□□ 1.79
COL4A5P29400 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC26.25■■□□□ 1.79
COL4A5P29400 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
COL4A5P29400 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC26.25■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms