Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TNFRSF1BP20333 AC026471.6-201ENST00000622954 1905 ntBASIC20.06■□□□□ 0.8
TNFRSF1BP20333 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
TNFRSF1BP20333 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TNFRSF1BP20333 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
TNFRSF1BP20333 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TNFRSF1BP20333 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
TNFRSF1BP20333 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TNFRSF1BP20333 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TNFRSF1BP20333 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.05■□□□□ 0.8
TNFRSF1BP20333 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.05■□□□□ 0.8
TNFRSF1BP20333 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TNFRSF1BP20333 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TNFRSF1BP20333 AL117332.1-201ENST00000622628 974 ntBASIC20.05■□□□□ 0.8
TNFRSF1BP20333 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TNFRSF1BP20333 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.05■□□□□ 0.8
TNFRSF1BP20333 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
TNFRSF1BP20333 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TNFRSF1BP20333 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.05■□□□□ 0.8
TNFRSF1BP20333 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
TNFRSF1BP20333 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TNFRSF1BP20333 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
TNFRSF1BP20333 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TNFRSF1BP20333 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
TNFRSF1BP20333 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.04■□□□□ 0.8
TNFRSF1BP20333 AC006455.2-201ENST00000429931 906 ntBASIC20.04■□□□□ 0.8
TNFRSF1BP20333 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.04■□□□□ 0.8
TNFRSF1BP20333 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.04■□□□□ 0.8
TNFRSF1BP20333 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.04■□□□□ 0.8
TNFRSF1BP20333 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TNFRSF1BP20333 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.04■□□□□ 0.8
TNFRSF1BP20333 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TNFRSF1BP20333 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
TNFRSF1BP20333 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
TNFRSF1BP20333 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TNFRSF1BP20333 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.03■□□□□ 0.8
TNFRSF1BP20333 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.03■□□□□ 0.8
TNFRSF1BP20333 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TNFRSF1BP20333 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TNFRSF1BP20333 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TNFRSF1BP20333 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TNFRSF1BP20333 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
TNFRSF1BP20333 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TNFRSF1BP20333 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.03■□□□□ 0.8
TNFRSF1BP20333 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TNFRSF1BP20333 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
TNFRSF1BP20333 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.03■□□□□ 0.8
TNFRSF1BP20333 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.03■□□□□ 0.8
TNFRSF1BP20333 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.03■□□□□ 0.8
TNFRSF1BP20333 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.03■□□□□ 0.8
TNFRSF1BP20333 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TNFRSF1BP20333 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TNFRSF1BP20333 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TNFRSF1BP20333 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TNFRSF1BP20333 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
TNFRSF1BP20333 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.02■□□□□ 0.8
TNFRSF1BP20333 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TNFRSF1BP20333 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.02■□□□□ 0.8
TNFRSF1BP20333 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TNFRSF1BP20333 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TNFRSF1BP20333 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TNFRSF1BP20333 MIR6724-1-201ENST00000616420 92 ntBASIC20.02■□□□□ 0.8
TNFRSF1BP20333 MIR6724-2-201ENST00000616483 92 ntBASIC20.02■□□□□ 0.8
TNFRSF1BP20333 MIR6724-4-201ENST00000617390 92 ntBASIC20.02■□□□□ 0.8
TNFRSF1BP20333 MIR6724-3-201ENST00000622482 92 ntBASIC20.02■□□□□ 0.8
TNFRSF1BP20333 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
TNFRSF1BP20333 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TNFRSF1BP20333 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TNFRSF1BP20333 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.02■□□□□ 0.8
TNFRSF1BP20333 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TNFRSF1BP20333 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TNFRSF1BP20333 Z98882.1-201ENST00000622160 2253 ntBASIC20.02■□□□□ 0.8
TNFRSF1BP20333 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
TNFRSF1BP20333 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.02■□□□□ 0.79
TNFRSF1BP20333 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TNFRSF1BP20333 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TNFRSF1BP20333 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TNFRSF1BP20333 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.02■□□□□ 0.79
TNFRSF1BP20333 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TNFRSF1BP20333 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TNFRSF1BP20333 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.01■□□□□ 0.79
TNFRSF1BP20333 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.01■□□□□ 0.79
TNFRSF1BP20333 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
TNFRSF1BP20333 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.01■□□□□ 0.79
TNFRSF1BP20333 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TNFRSF1BP20333 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TNFRSF1BP20333 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TNFRSF1BP20333 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TNFRSF1BP20333 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TNFRSF1BP20333 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TNFRSF1BP20333 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TNFRSF1BP20333 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
TNFRSF1BP20333 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20■□□□□ 0.79
TNFRSF1BP20333 AC133637.1-201ENST00000624115 1537 ntBASIC20■□□□□ 0.79
TNFRSF1BP20333 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TNFRSF1BP20333 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TNFRSF1BP20333 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
TNFRSF1BP20333 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TNFRSF1BP20333 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
TNFRSF1BP20333 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 7.1 ms