Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
HOXC6P09630 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
HOXC6P09630 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
HOXC6P09630 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC24.61■■□□□ 1.53
HOXC6P09630 PXK-203ENST00000383715 1756 ntTSL 5 BASIC24.61■■□□□ 1.53
HOXC6P09630 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
HOXC6P09630 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
HOXC6P09630 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
HOXC6P09630 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
HOXC6P09630 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
HOXC6P09630 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
HOXC6P09630 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC24.6■■□□□ 1.53
HOXC6P09630 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
HOXC6P09630 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC24.6■■□□□ 1.53
HOXC6P09630 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC24.6■■□□□ 1.53
HOXC6P09630 RGMA-211ENST00000557420 989 ntTSL 3 BASIC24.6■■□□□ 1.53
HOXC6P09630 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC24.6■■□□□ 1.53
HOXC6P09630 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC24.6■■□□□ 1.53
HOXC6P09630 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC24.6■■□□□ 1.53
HOXC6P09630 AC066615.1-201ENST00000640911 628 ntBASIC24.6■■□□□ 1.53
HOXC6P09630 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC24.6■■□□□ 1.53
HOXC6P09630 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC24.6■■□□□ 1.53
HOXC6P09630 ABCB10P4-201ENST00000566803 2184 ntBASIC24.6■■□□□ 1.53
HOXC6P09630 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC24.59■■□□□ 1.53
HOXC6P09630 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
HOXC6P09630 SLC29A4P1-201ENST00000398760 971 ntBASIC24.59■■□□□ 1.53
HOXC6P09630 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC24.59■■□□□ 1.53
HOXC6P09630 AC133552.2-202ENST00000575694 574 ntBASIC24.59■■□□□ 1.53
HOXC6P09630 PFKL-212ENST00000628044 129 ntTSL 3 BASIC24.59■■□□□ 1.53
HOXC6P09630 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC24.59■■□□□ 1.53
HOXC6P09630 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
HOXC6P09630 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
HOXC6P09630 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.53
HOXC6P09630 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
HOXC6P09630 AC069152.1-201ENST00000438030 544 ntBASIC24.58■■□□□ 1.53
HOXC6P09630 SERP1-208ENST00000491660 830 ntTSL 2 BASIC24.58■■□□□ 1.53
HOXC6P09630 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC24.58■■□□□ 1.53
HOXC6P09630 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC24.58■■□□□ 1.53
HOXC6P09630 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
HOXC6P09630 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.52
HOXC6P09630 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC24.57■■□□□ 1.52
HOXC6P09630 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
HOXC6P09630 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
HOXC6P09630 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
HOXC6P09630 KRT18P20-201ENST00000548986 1279 ntBASIC24.57■■□□□ 1.52
HOXC6P09630 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
HOXC6P09630 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC24.57■■□□□ 1.52
HOXC6P09630 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC24.57■■□□□ 1.52
HOXC6P09630 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
HOXC6P09630 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC24.57■■□□□ 1.52
HOXC6P09630 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
HOXC6P09630 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
HOXC6P09630 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC24.56■■□□□ 1.52
HOXC6P09630 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC24.56■■□□□ 1.52
HOXC6P09630 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC24.56■■□□□ 1.52
HOXC6P09630 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
HOXC6P09630 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC24.56■■□□□ 1.52
HOXC6P09630 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC24.56■■□□□ 1.52
HOXC6P09630 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
HOXC6P09630 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC24.56■■□□□ 1.52
HOXC6P09630 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC24.56■■□□□ 1.52
HOXC6P09630 AC093323.1-202ENST00000635031 2045 ntBASIC24.56■■□□□ 1.52
HOXC6P09630 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
HOXC6P09630 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC24.55■■□□□ 1.52
HOXC6P09630 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
HOXC6P09630 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
HOXC6P09630 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC24.55■■□□□ 1.52
HOXC6P09630 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
HOXC6P09630 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC24.55■■□□□ 1.52
HOXC6P09630 AC010141.2-201ENST00000452426 721 ntBASIC24.55■■□□□ 1.52
HOXC6P09630 AF201337.1-201ENST00000520239 748 ntBASIC24.55■■□□□ 1.52
HOXC6P09630 AC138907.5-202ENST00000569484 235 ntBASIC24.55■■□□□ 1.52
HOXC6P09630 AC133041.1-202ENST00000642053 222 ntBASIC24.55■■□□□ 1.52
HOXC6P09630 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC24.54■■□□□ 1.52
HOXC6P09630 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
HOXC6P09630 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
HOXC6P09630 APTR-203ENST00000430801 583 ntTSL 5 BASIC24.54■■□□□ 1.52
HOXC6P09630 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC24.54■■□□□ 1.52
HOXC6P09630 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC24.54■■□□□ 1.52
HOXC6P09630 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
HOXC6P09630 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
HOXC6P09630 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC24.54■■□□□ 1.52
HOXC6P09630 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
HOXC6P09630 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
HOXC6P09630 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
HOXC6P09630 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
HOXC6P09630 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
HOXC6P09630 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
HOXC6P09630 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC24.53■■□□□ 1.52
HOXC6P09630 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC24.53■■□□□ 1.52
HOXC6P09630 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC24.53■■□□□ 1.52
HOXC6P09630 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC24.53■■□□□ 1.52
HOXC6P09630 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC24.53■■□□□ 1.52
HOXC6P09630 MIR4651-201ENST00000582622 73 ntBASIC24.53■■□□□ 1.52
HOXC6P09630 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC24.53■■□□□ 1.52
HOXC6P09630 AC010536.3-201ENST00000620306 533 ntBASIC24.53■■□□□ 1.52
HOXC6P09630 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
HOXC6P09630 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC24.53■■□□□ 1.52
HOXC6P09630 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
HOXC6P09630 DUSP8P5-201ENST00000422884 1815 ntBASIC24.52■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms