Protein–RNA interactions for Protein: P09001

MRPL3, 39S ribosomal protein L3, mitochondrial, humanhuman

Known RBP Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL3P09001 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.35■□□□□ 0.69
MRPL3P09001 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
MRPL3P09001 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
MRPL3P09001 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
MRPL3P09001 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
MRPL3P09001 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.35■□□□□ 0.69
MRPL3P09001 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
MRPL3P09001 TSPY9P-201ENST00000440215 945 ntBASIC19.35■□□□□ 0.69
MRPL3P09001 TSPY11P-201ENST00000442607 1045 ntBASIC19.35■□□□□ 0.69
MRPL3P09001 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC19.35■□□□□ 0.69
MRPL3P09001 MIR4787-201ENST00000607364 84 ntBASIC19.35■□□□□ 0.69
MRPL3P09001 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
MRPL3P09001 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
MRPL3P09001 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
MRPL3P09001 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
MRPL3P09001 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
MRPL3P09001 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.35■□□□□ 0.69
MRPL3P09001 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MRPL3P09001 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
MRPL3P09001 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
MRPL3P09001 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.34■□□□□ 0.69
MRPL3P09001 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
MRPL3P09001 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC19.34■□□□□ 0.69
MRPL3P09001 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.34■□□□□ 0.69
MRPL3P09001 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
MRPL3P09001 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
MRPL3P09001 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC19.34■□□□□ 0.69
MRPL3P09001 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MRPL3P09001 AC244015.2-201ENST00000616358 1861 ntBASIC19.34■□□□□ 0.69
MRPL3P09001 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MRPL3P09001 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MRPL3P09001 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MRPL3P09001 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.33■□□□□ 0.69
MRPL3P09001 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.69
MRPL3P09001 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
MRPL3P09001 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
MRPL3P09001 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
MRPL3P09001 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
MRPL3P09001 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.33■□□□□ 0.69
MRPL3P09001 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
MRPL3P09001 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
MRPL3P09001 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.33■□□□□ 0.68
MRPL3P09001 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
MRPL3P09001 AC010997.5-201ENST00000609182 354 ntBASIC19.33■□□□□ 0.68
MRPL3P09001 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
MRPL3P09001 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
MRPL3P09001 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
MRPL3P09001 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
MRPL3P09001 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
MRPL3P09001 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
MRPL3P09001 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.33■□□□□ 0.68
MRPL3P09001 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
MRPL3P09001 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
MRPL3P09001 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
MRPL3P09001 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.32■□□□□ 0.68
MRPL3P09001 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
MRPL3P09001 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
MRPL3P09001 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
MRPL3P09001 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.32■□□□□ 0.68
MRPL3P09001 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
MRPL3P09001 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
MRPL3P09001 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
MRPL3P09001 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
MRPL3P09001 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
MRPL3P09001 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
MRPL3P09001 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
MRPL3P09001 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
MRPL3P09001 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
MRPL3P09001 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
MRPL3P09001 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
MRPL3P09001 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
MRPL3P09001 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
MRPL3P09001 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MRPL3P09001 AC239859.2-201ENST00000444165 318 ntBASIC19.31■□□□□ 0.68
MRPL3P09001 Z92544.1-202ENST00000571933 1220 ntBASIC19.31■□□□□ 0.68
MRPL3P09001 EXOG-217ENST00000630638 197 ntTSL 5 BASIC19.31■□□□□ 0.68
MRPL3P09001 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
MRPL3P09001 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MRPL3P09001 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.31■□□□□ 0.68
MRPL3P09001 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.31■□□□□ 0.68
MRPL3P09001 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
MRPL3P09001 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MRPL3P09001 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
MRPL3P09001 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
MRPL3P09001 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
MRPL3P09001 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
MRPL3P09001 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MRPL3P09001 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
MRPL3P09001 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
MRPL3P09001 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.3■□□□□ 0.68
MRPL3P09001 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.3■□□□□ 0.68
MRPL3P09001 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.3■□□□□ 0.68
MRPL3P09001 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
MRPL3P09001 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.3■□□□□ 0.68
MRPL3P09001 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
MRPL3P09001 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.29■□□□□ 0.68
MRPL3P09001 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MRPL3P09001 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MRPL3P09001 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.29■□□□□ 0.68
MRPL3P09001 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms