Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
THBS1P07996 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
THBS1P07996 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
THBS1P07996 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.91■□□□□ 0.78
THBS1P07996 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
THBS1P07996 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
THBS1P07996 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
THBS1P07996 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
THBS1P07996 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
THBS1P07996 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.9■□□□□ 0.78
THBS1P07996 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
THBS1P07996 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
THBS1P07996 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.9■□□□□ 0.78
THBS1P07996 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
THBS1P07996 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
THBS1P07996 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
THBS1P07996 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
THBS1P07996 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
THBS1P07996 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
THBS1P07996 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
THBS1P07996 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
THBS1P07996 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
THBS1P07996 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
THBS1P07996 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
THBS1P07996 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
THBS1P07996 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.89■□□□□ 0.77
THBS1P07996 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
THBS1P07996 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
THBS1P07996 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
THBS1P07996 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
THBS1P07996 AL136116.3-201ENST00000402907 1138 ntBASIC19.89■□□□□ 0.77
THBS1P07996 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
THBS1P07996 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.89■□□□□ 0.77
THBS1P07996 OXCT2P1-201ENST00000447263 1535 ntBASIC19.89■□□□□ 0.77
THBS1P07996 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
THBS1P07996 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.89■□□□□ 0.77
THBS1P07996 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.89■□□□□ 0.77
THBS1P07996 AP005435.1-201ENST00000529293 1178 ntBASIC19.89■□□□□ 0.77
THBS1P07996 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.89■□□□□ 0.77
THBS1P07996 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
THBS1P07996 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
THBS1P07996 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
THBS1P07996 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.89■□□□□ 0.77
THBS1P07996 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.88■□□□□ 0.77
THBS1P07996 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
THBS1P07996 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
THBS1P07996 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
THBS1P07996 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
THBS1P07996 MIR935-201ENST00000401179 91 ntBASIC19.88■□□□□ 0.77
THBS1P07996 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.88■□□□□ 0.77
THBS1P07996 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.88■□□□□ 0.77
THBS1P07996 AC110285.6-201ENST00000617652 491 ntBASIC19.88■□□□□ 0.77
THBS1P07996 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
THBS1P07996 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
THBS1P07996 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
THBS1P07996 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
THBS1P07996 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
THBS1P07996 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
THBS1P07996 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.88■□□□□ 0.77
THBS1P07996 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
THBS1P07996 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
THBS1P07996 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
THBS1P07996 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
THBS1P07996 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.87■□□□□ 0.77
THBS1P07996 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
THBS1P07996 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
THBS1P07996 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
THBS1P07996 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
THBS1P07996 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.87■□□□□ 0.77
THBS1P07996 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.87■□□□□ 0.77
THBS1P07996 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.87■□□□□ 0.77
THBS1P07996 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
THBS1P07996 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.87■□□□□ 0.77
THBS1P07996 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.87■□□□□ 0.77
THBS1P07996 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
THBS1P07996 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.87■□□□□ 0.77
THBS1P07996 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
THBS1P07996 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
THBS1P07996 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.86■□□□□ 0.77
THBS1P07996 SLC47A1P1-202ENST00000449666 945 ntBASIC19.86■□□□□ 0.77
THBS1P07996 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.86■□□□□ 0.77
THBS1P07996 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
THBS1P07996 RALB-208ENST00000631312 311 ntTSL 5 BASIC19.86■□□□□ 0.77
THBS1P07996 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
THBS1P07996 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
THBS1P07996 AC244015.2-201ENST00000616358 1861 ntBASIC19.86■□□□□ 0.77
THBS1P07996 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
THBS1P07996 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
THBS1P07996 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
THBS1P07996 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.85■□□□□ 0.77
THBS1P07996 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
THBS1P07996 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
THBS1P07996 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.85■□□□□ 0.77
THBS1P07996 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.85■□□□□ 0.77
THBS1P07996 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.85■□□□□ 0.77
THBS1P07996 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC19.85■□□□□ 0.77
THBS1P07996 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.85■□□□□ 0.77
THBS1P07996 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
THBS1P07996 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.85■□□□□ 0.77
THBS1P07996 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms