Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 FXN-202ENST00000396364 980 ntTSL 5 BASIC23.06■■□□□ 1.28
RB1P06400 POU5F1P3-201ENST00000428824 1078 ntBASIC23.06■■□□□ 1.28
RB1P06400 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC23.06■■□□□ 1.28
RB1P06400 SLC7A5P1-201ENST00000568957 537 ntBASIC23.06■■□□□ 1.28
RB1P06400 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
RB1P06400 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RB1P06400 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
RB1P06400 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC23.06■■□□□ 1.28
RB1P06400 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RB1P06400 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC23.05■■□□□ 1.28
RB1P06400 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RB1P06400 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
RB1P06400 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC23.05■■□□□ 1.28
RB1P06400 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
RB1P06400 AC008687.6-201ENST00000596318 630 ntBASIC23.05■■□□□ 1.28
RB1P06400 ITM2C-210ENST00000620962 501 ntBASIC23.05■■□□□ 1.28
RB1P06400 AC013268.1-206ENST00000638368 961 ntBASIC23.05■■□□□ 1.28
RB1P06400 AC112229.1-201ENST00000639295 961 ntBASIC23.05■■□□□ 1.28
RB1P06400 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
RB1P06400 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC23.05■■□□□ 1.28
RB1P06400 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RB1P06400 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC23.05■■□□□ 1.28
RB1P06400 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC23.04■■□□□ 1.28
RB1P06400 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RB1P06400 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
RB1P06400 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
RB1P06400 AC093827.2-201ENST00000512654 315 ntBASIC23.04■■□□□ 1.28
RB1P06400 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC23.03■■□□□ 1.28
RB1P06400 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RB1P06400 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
RB1P06400 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
RB1P06400 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
RB1P06400 DET1-205ENST00000558413 583 ntTSL 4 BASIC23.03■■□□□ 1.28
RB1P06400 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
RB1P06400 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RB1P06400 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RB1P06400 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC23.02■■□□□ 1.28
RB1P06400 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
RB1P06400 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
RB1P06400 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
RB1P06400 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
RB1P06400 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RB1P06400 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC23.02■■□□□ 1.28
RB1P06400 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC23.02■■□□□ 1.28
RB1P06400 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
RB1P06400 AC098934.4-201ENST00000564127 592 ntBASIC23.02■■□□□ 1.28
RB1P06400 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC23.02■■□□□ 1.28
RB1P06400 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC23.02■■□□□ 1.28
RB1P06400 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC23.02■■□□□ 1.28
RB1P06400 H19-210ENST00000439725 1929 ntTSL 2 BASIC23.02■■□□□ 1.28
RB1P06400 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
RB1P06400 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC23.01■■□□□ 1.27
RB1P06400 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC23.01■■□□□ 1.27
RB1P06400 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RB1P06400 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RB1P06400 BET1L-204ENST00000410108 637 ntTSL 3 BASIC23.01■■□□□ 1.27
RB1P06400 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC23.01■■□□□ 1.27
RB1P06400 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC23.01■■□□□ 1.27
RB1P06400 TERF1P5-201ENST00000477545 1207 ntBASIC23.01■■□□□ 1.27
RB1P06400 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RB1P06400 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC23.01■■□□□ 1.27
RB1P06400 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RB1P06400 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RB1P06400 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC23.01■■□□□ 1.27
RB1P06400 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RB1P06400 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC23■■□□□ 1.27
RB1P06400 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
RB1P06400 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RB1P06400 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC23■■□□□ 1.27
RB1P06400 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC23■■□□□ 1.27
RB1P06400 KRT18P29-201ENST00000397031 1267 ntBASIC23■■□□□ 1.27
RB1P06400 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC23■■□□□ 1.27
RB1P06400 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC23■■□□□ 1.27
RB1P06400 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC23■■□□□ 1.27
RB1P06400 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RB1P06400 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC23■■□□□ 1.27
RB1P06400 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC23■■□□□ 1.27
RB1P06400 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC23■■□□□ 1.27
RB1P06400 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC23■■□□□ 1.27
RB1P06400 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
RB1P06400 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
RB1P06400 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RB1P06400 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
RB1P06400 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
RB1P06400 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC22.99■■□□□ 1.27
RB1P06400 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RB1P06400 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
RB1P06400 MIPEPP3-201ENST00000412105 444 ntBASIC22.99■■□□□ 1.27
RB1P06400 AC079089.2-201ENST00000531211 1277 ntBASIC22.99■■□□□ 1.27
RB1P06400 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC22.99■■□□□ 1.27
RB1P06400 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC22.99■■□□□ 1.27
RB1P06400 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC22.99■■□□□ 1.27
RB1P06400 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RB1P06400 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
RB1P06400 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RB1P06400 AC068338.2-201ENST00000563278 1430 ntBASIC22.99■■□□□ 1.27
RB1P06400 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RB1P06400 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RB1P06400 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RB1P06400 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms