Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.15■□□□□ 0.82
PDGFAP04085 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
PDGFAP04085 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PDGFAP04085 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
PDGFAP04085 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PDGFAP04085 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PDGFAP04085 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.14■□□□□ 0.81
PDGFAP04085 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.14■□□□□ 0.81
PDGFAP04085 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PDGFAP04085 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.14■□□□□ 0.81
PDGFAP04085 MIR663A-201ENST00000385250 93 ntBASIC20.14■□□□□ 0.81
PDGFAP04085 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.14■□□□□ 0.81
PDGFAP04085 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PDGFAP04085 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PDGFAP04085 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
PDGFAP04085 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PDGFAP04085 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PDGFAP04085 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PDGFAP04085 AC142381.3-201ENST00000568208 1670 ntBASIC20.13■□□□□ 0.81
PDGFAP04085 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PDGFAP04085 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PDGFAP04085 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
PDGFAP04085 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
PDGFAP04085 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.13■□□□□ 0.81
PDGFAP04085 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.13■□□□□ 0.81
PDGFAP04085 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.13■□□□□ 0.81
PDGFAP04085 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.13■□□□□ 0.81
PDGFAP04085 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PDGFAP04085 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PDGFAP04085 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.13■□□□□ 0.81
PDGFAP04085 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
PDGFAP04085 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PDGFAP04085 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PDGFAP04085 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.13■□□□□ 0.81
PDGFAP04085 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
PDGFAP04085 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PDGFAP04085 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PDGFAP04085 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PDGFAP04085 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PDGFAP04085 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
PDGFAP04085 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.12■□□□□ 0.81
PDGFAP04085 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
PDGFAP04085 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PDGFAP04085 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PDGFAP04085 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.12■□□□□ 0.81
PDGFAP04085 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PDGFAP04085 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PDGFAP04085 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
PDGFAP04085 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
PDGFAP04085 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PDGFAP04085 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
PDGFAP04085 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
PDGFAP04085 ESRRAP2-201ENST00000418437 1549 ntBASIC20.12■□□□□ 0.81
PDGFAP04085 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PDGFAP04085 SLC25A24-204ENST00000569674 2357 ntBASIC20.12■□□□□ 0.81
PDGFAP04085 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.11■□□□□ 0.81
PDGFAP04085 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.11■□□□□ 0.81
PDGFAP04085 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDGFAP04085 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PDGFAP04085 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDGFAP04085 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDGFAP04085 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDGFAP04085 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC20.11■□□□□ 0.81
PDGFAP04085 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDGFAP04085 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PDGFAP04085 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PDGFAP04085 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
PDGFAP04085 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.11■□□□□ 0.81
PDGFAP04085 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.11■□□□□ 0.81
PDGFAP04085 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.11■□□□□ 0.81
PDGFAP04085 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PDGFAP04085 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.11■□□□□ 0.81
PDGFAP04085 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDGFAP04085 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDGFAP04085 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDGFAP04085 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.11■□□□□ 0.81
PDGFAP04085 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDGFAP04085 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDGFAP04085 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDGFAP04085 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.11■□□□□ 0.81
PDGFAP04085 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PDGFAP04085 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
PDGFAP04085 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PDGFAP04085 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
PDGFAP04085 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PDGFAP04085 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PDGFAP04085 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.1■□□□□ 0.81
PDGFAP04085 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.1■□□□□ 0.81
PDGFAP04085 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.1■□□□□ 0.81
PDGFAP04085 AC079630.1-202ENST00000618127 1840 ntBASIC20.1■□□□□ 0.81
PDGFAP04085 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.1■□□□□ 0.81
PDGFAP04085 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.1■□□□□ 0.81
PDGFAP04085 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PDGFAP04085 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
PDGFAP04085 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PDGFAP04085 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PDGFAP04085 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PDGFAP04085 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.09■□□□□ 0.81
PDGFAP04085 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.09■□□□□ 0.81
PDGFAP04085 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms