Protein–RNA interactions for Protein: P04035

HMGCR, 3-hydroxy-3-methylglutaryl-coenzyme A reductase, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCRP04035 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC24.57■■□□□ 1.52
HMGCRP04035 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC24.57■■□□□ 1.52
HMGCRP04035 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
HMGCRP04035 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC24.57■■□□□ 1.52
HMGCRP04035 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC24.57■■□□□ 1.52
HMGCRP04035 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC24.57■■□□□ 1.52
HMGCRP04035 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC24.57■■□□□ 1.52
HMGCRP04035 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
HMGCRP04035 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
HMGCRP04035 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC24.57■■□□□ 1.52
HMGCRP04035 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
HMGCRP04035 PREB-202ENST00000406567 1910 ntTSL 5 BASIC24.57■■□□□ 1.52
HMGCRP04035 AL353803.4-201ENST00000565882 1934 ntBASIC24.57■■□□□ 1.52
HMGCRP04035 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
HMGCRP04035 LINC00543-201ENST00000567234 1845 ntBASIC24.56■■□□□ 1.52
HMGCRP04035 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
HMGCRP04035 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
HMGCRP04035 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
HMGCRP04035 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
HMGCRP04035 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC24.56■■□□□ 1.52
HMGCRP04035 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC24.56■■□□□ 1.52
HMGCRP04035 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC24.56■■□□□ 1.52
HMGCRP04035 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
HMGCRP04035 MIR4758-201ENST00000577688 71 ntBASIC24.56■■□□□ 1.52
HMGCRP04035 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC24.56■■□□□ 1.52
HMGCRP04035 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
HMGCRP04035 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
HMGCRP04035 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
HMGCRP04035 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
HMGCRP04035 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
HMGCRP04035 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
HMGCRP04035 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
HMGCRP04035 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC24.55■■□□□ 1.52
HMGCRP04035 SERP1-208ENST00000491660 830 ntTSL 2 BASIC24.55■■□□□ 1.52
HMGCRP04035 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
HMGCRP04035 AC010536.3-201ENST00000620306 533 ntBASIC24.55■■□□□ 1.52
HMGCRP04035 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
HMGCRP04035 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
HMGCRP04035 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
HMGCRP04035 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
HMGCRP04035 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
HMGCRP04035 RNA5SP413-201ENST00000516373 109 ntBASIC24.54■■□□□ 1.52
HMGCRP04035 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
HMGCRP04035 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC24.54■■□□□ 1.52
HMGCRP04035 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
HMGCRP04035 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
HMGCRP04035 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
HMGCRP04035 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.52
HMGCRP04035 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
HMGCRP04035 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.52
HMGCRP04035 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC24.53■■□□□ 1.52
HMGCRP04035 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC24.53■■□□□ 1.52
HMGCRP04035 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
HMGCRP04035 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC24.53■■□□□ 1.52
HMGCRP04035 PRORSD1P-201ENST00000295112 541 ntBASIC24.52■■□□□ 1.52
HMGCRP04035 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC24.52■■□□□ 1.52
HMGCRP04035 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
HMGCRP04035 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
HMGCRP04035 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC24.52■■□□□ 1.52
HMGCRP04035 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
HMGCRP04035 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
HMGCRP04035 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
HMGCRP04035 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC24.51■■□□□ 1.51
HMGCRP04035 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
HMGCRP04035 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
HMGCRP04035 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
HMGCRP04035 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC24.51■■□□□ 1.51
HMGCRP04035 PXK-203ENST00000383715 1756 ntTSL 5 BASIC24.51■■□□□ 1.51
HMGCRP04035 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
HMGCRP04035 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
HMGCRP04035 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
HMGCRP04035 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
HMGCRP04035 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
HMGCRP04035 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
HMGCRP04035 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC24.5■■□□□ 1.51
HMGCRP04035 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
HMGCRP04035 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
HMGCRP04035 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
HMGCRP04035 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC24.5■■□□□ 1.51
HMGCRP04035 AC010141.2-201ENST00000452426 721 ntBASIC24.5■■□□□ 1.51
HMGCRP04035 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC24.5■■□□□ 1.51
HMGCRP04035 KRT18P20-201ENST00000548986 1279 ntBASIC24.5■■□□□ 1.51
HMGCRP04035 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC24.5■■□□□ 1.51
HMGCRP04035 ARL16-209ENST00000573715 763 ntTSL 3 BASIC24.5■■□□□ 1.51
HMGCRP04035 ARL16-211ENST00000576135 694 ntTSL 3 BASIC24.5■■□□□ 1.51
HMGCRP04035 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC24.5■■□□□ 1.51
HMGCRP04035 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
HMGCRP04035 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
HMGCRP04035 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
HMGCRP04035 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC24.49■■□□□ 1.51
HMGCRP04035 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC24.49■■□□□ 1.51
HMGCRP04035 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC24.49■■□□□ 1.51
HMGCRP04035 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC24.49■■□□□ 1.51
HMGCRP04035 AC013268.1-206ENST00000638368 961 ntBASIC24.49■■□□□ 1.51
HMGCRP04035 AC112229.1-201ENST00000639295 961 ntBASIC24.49■■□□□ 1.51
HMGCRP04035 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC24.49■■□□□ 1.51
HMGCRP04035 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
HMGCRP04035 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC24.48■■□□□ 1.51
HMGCRP04035 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
HMGCRP04035 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC24.48■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms