Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC23.68■■□□□ 1.38
TIMP1P01033 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
TIMP1P01033 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TIMP1P01033 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
TIMP1P01033 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TIMP1P01033 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TIMP1P01033 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TIMP1P01033 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
TIMP1P01033 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
TIMP1P01033 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC23.68■■□□□ 1.38
TIMP1P01033 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TIMP1P01033 BMP1-204ENST00000397814 836 ntTSL 4 BASIC23.68■■□□□ 1.38
TIMP1P01033 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC23.68■■□□□ 1.38
TIMP1P01033 UQCRFS1P1-201ENST00000435169 820 ntBASIC23.68■■□□□ 1.38
TIMP1P01033 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
TIMP1P01033 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC23.68■■□□□ 1.38
TIMP1P01033 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
TIMP1P01033 BET1L-204ENST00000410108 637 ntTSL 3 BASIC23.67■■□□□ 1.38
TIMP1P01033 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC23.67■■□□□ 1.38
TIMP1P01033 CYP2T1P-201ENST00000432607 1285 ntBASIC23.67■■□□□ 1.38
TIMP1P01033 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC23.67■■□□□ 1.38
TIMP1P01033 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
TIMP1P01033 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
TIMP1P01033 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
TIMP1P01033 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
TIMP1P01033 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
TIMP1P01033 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
TIMP1P01033 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
TIMP1P01033 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
TIMP1P01033 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
TIMP1P01033 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TIMP1P01033 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC23.66■■□□□ 1.38
TIMP1P01033 DUSP5P2-201ENST00000426873 1033 ntBASIC23.66■■□□□ 1.38
TIMP1P01033 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC23.66■■□□□ 1.38
TIMP1P01033 AC098590.1-201ENST00000468126 897 ntBASIC23.66■■□□□ 1.38
TIMP1P01033 PHB2-213ENST00000546111 858 ntTSL 2 BASIC23.66■■□□□ 1.38
TIMP1P01033 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC23.66■■□□□ 1.38
TIMP1P01033 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC23.66■■□□□ 1.38
TIMP1P01033 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC23.66■■□□□ 1.38
TIMP1P01033 DUSP8P5-201ENST00000422884 1815 ntBASIC23.66■■□□□ 1.38
TIMP1P01033 MED17-227ENST00000640521 2047 ntTSL 5 BASIC23.66■■□□□ 1.38
TIMP1P01033 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TIMP1P01033 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TIMP1P01033 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC23.65■■□□□ 1.38
TIMP1P01033 RHEB-204ENST00000472642 900 ntTSL 3 BASIC23.65■■□□□ 1.38
TIMP1P01033 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC23.65■■□□□ 1.38
TIMP1P01033 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC23.65■■□□□ 1.38
TIMP1P01033 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC23.65■■□□□ 1.38
TIMP1P01033 AC092118.2-201ENST00000613495 667 ntBASIC23.65■■□□□ 1.38
TIMP1P01033 OR10C1-204ENST00000622521 1039 ntBASIC23.65■■□□□ 1.38
TIMP1P01033 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
TIMP1P01033 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC23.65■■□□□ 1.38
TIMP1P01033 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC23.65■■□□□ 1.38
TIMP1P01033 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC23.65■■□□□ 1.38
TIMP1P01033 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC23.64■■□□□ 1.38
TIMP1P01033 LINC00543-201ENST00000567234 1845 ntBASIC23.64■■□□□ 1.38
TIMP1P01033 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
TIMP1P01033 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC23.64■■□□□ 1.37
TIMP1P01033 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
TIMP1P01033 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
TIMP1P01033 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC23.64■■□□□ 1.37
TIMP1P01033 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC23.64■■□□□ 1.37
TIMP1P01033 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
TIMP1P01033 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC23.64■■□□□ 1.37
TIMP1P01033 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC23.64■■□□□ 1.37
TIMP1P01033 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
TIMP1P01033 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TIMP1P01033 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TIMP1P01033 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
TIMP1P01033 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC23.63■■□□□ 1.37
TIMP1P01033 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
TIMP1P01033 AC007322.4-201ENST00000509611 723 ntBASIC23.63■■□□□ 1.37
TIMP1P01033 RARRES2P4-201ENST00000514074 484 ntBASIC23.63■■□□□ 1.37
TIMP1P01033 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC23.63■■□□□ 1.37
TIMP1P01033 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC23.63■■□□□ 1.37
TIMP1P01033 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
TIMP1P01033 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
TIMP1P01033 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TIMP1P01033 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TIMP1P01033 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
TIMP1P01033 FXN-202ENST00000396364 980 ntTSL 5 BASIC23.62■■□□□ 1.37
TIMP1P01033 AL512625.2-201ENST00000417533 625 ntBASIC23.62■■□□□ 1.37
TIMP1P01033 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC23.62■■□□□ 1.37
TIMP1P01033 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
TIMP1P01033 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
TIMP1P01033 GCSHP5-201ENST00000443090 522 ntBASIC23.62■■□□□ 1.37
TIMP1P01033 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC23.62■■□□□ 1.37
TIMP1P01033 IRX5-204ENST00000560154 879 ntTSL 5 BASIC23.62■■□□□ 1.37
TIMP1P01033 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC23.62■■□□□ 1.37
TIMP1P01033 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC23.62■■□□□ 1.37
TIMP1P01033 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC23.62■■□□□ 1.37
TIMP1P01033 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
TIMP1P01033 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC23.62■■□□□ 1.37
TIMP1P01033 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC23.62■■□□□ 1.37
TIMP1P01033 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
TIMP1P01033 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC23.61■■□□□ 1.37
TIMP1P01033 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
TIMP1P01033 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC23.61■■□□□ 1.37
TIMP1P01033 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC23.61■■□□□ 1.37
TIMP1P01033 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC23.61■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms