Protein–RNA interactions for Protein: O95164

UBL3, Ubiquitin-like protein 3, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3O95164 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
UBL3O95164 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.32■□□□□ 0.68
UBL3O95164 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
UBL3O95164 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
UBL3O95164 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
UBL3O95164 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
UBL3O95164 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.32■□□□□ 0.68
UBL3O95164 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.32■□□□□ 0.68
UBL3O95164 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
UBL3O95164 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
UBL3O95164 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
UBL3O95164 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
UBL3O95164 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
UBL3O95164 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
UBL3O95164 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
UBL3O95164 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
UBL3O95164 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
UBL3O95164 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
UBL3O95164 AC135279.3-201ENST00000610945 1311 ntBASIC19.31■□□□□ 0.68
UBL3O95164 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
UBL3O95164 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.31■□□□□ 0.68
UBL3O95164 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
UBL3O95164 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
UBL3O95164 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
UBL3O95164 AC004687.1-201ENST00000579003 1625 ntBASIC19.31■□□□□ 0.68
UBL3O95164 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
UBL3O95164 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
UBL3O95164 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
UBL3O95164 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBL3O95164 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.3■□□□□ 0.68
UBL3O95164 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
UBL3O95164 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.3■□□□□ 0.68
UBL3O95164 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBL3O95164 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.3■□□□□ 0.68
UBL3O95164 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.3■□□□□ 0.68
UBL3O95164 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.3■□□□□ 0.68
UBL3O95164 RALB-208ENST00000631312 311 ntTSL 5 BASIC19.3■□□□□ 0.68
UBL3O95164 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
UBL3O95164 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
UBL3O95164 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBL3O95164 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
UBL3O95164 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBL3O95164 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.3■□□□□ 0.68
UBL3O95164 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
UBL3O95164 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBL3O95164 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
UBL3O95164 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.29■□□□□ 0.68
UBL3O95164 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
UBL3O95164 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
UBL3O95164 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.29■□□□□ 0.68
UBL3O95164 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.29■□□□□ 0.68
UBL3O95164 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.29■□□□□ 0.68
UBL3O95164 AC024257.2-201ENST00000549699 147 ntBASIC19.29■□□□□ 0.68
UBL3O95164 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.29■□□□□ 0.68
UBL3O95164 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.29■□□□□ 0.68
UBL3O95164 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
UBL3O95164 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.29■□□□□ 0.68
UBL3O95164 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
UBL3O95164 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
UBL3O95164 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
UBL3O95164 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
UBL3O95164 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
UBL3O95164 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.28■□□□□ 0.68
UBL3O95164 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
UBL3O95164 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
UBL3O95164 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.28■□□□□ 0.68
UBL3O95164 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.28■□□□□ 0.68
UBL3O95164 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
UBL3O95164 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
UBL3O95164 PBX2P1-201ENST00000493219 1291 ntBASIC19.28■□□□□ 0.68
UBL3O95164 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.28■□□□□ 0.68
UBL3O95164 AL139246.5-201ENST00000606645 996 ntBASIC19.28■□□□□ 0.68
UBL3O95164 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
UBL3O95164 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
UBL3O95164 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
UBL3O95164 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
UBL3O95164 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
UBL3O95164 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
UBL3O95164 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
UBL3O95164 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
UBL3O95164 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
UBL3O95164 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.27■□□□□ 0.68
UBL3O95164 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
UBL3O95164 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
UBL3O95164 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
UBL3O95164 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
UBL3O95164 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
UBL3O95164 OR2I1P-207ENST00000453522 948 ntBASIC19.27■□□□□ 0.68
UBL3O95164 AC106739.1-201ENST00000617035 715 ntBASIC19.27■□□□□ 0.68
UBL3O95164 AC110285.6-201ENST00000617652 491 ntBASIC19.27■□□□□ 0.68
UBL3O95164 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
UBL3O95164 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
UBL3O95164 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
UBL3O95164 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
UBL3O95164 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
UBL3O95164 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
UBL3O95164 AC026310.3-201ENST00000625186 2373 ntBASIC19.27■□□□□ 0.67
UBL3O95164 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
UBL3O95164 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
UBL3O95164 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms