Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
USH2AO75445 TMPOP1-202ENST00000424642 1267 ntBASIC9.81□□□□□ -0.84
USH2AO75445 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC9.81□□□□□ -0.84
USH2AO75445 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
USH2AO75445 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
USH2AO75445 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
USH2AO75445 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
USH2AO75445 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
USH2AO75445 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC9.8□□□□□ -0.84
USH2AO75445 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC9.8□□□□□ -0.84
USH2AO75445 SPIB-206ENST00000596074 847 ntTSL 2 BASIC9.8□□□□□ -0.84
USH2AO75445 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC9.8□□□□□ -0.84
USH2AO75445 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
USH2AO75445 DUSP8P5-201ENST00000422884 1815 ntBASIC9.8□□□□□ -0.84
USH2AO75445 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC9.8□□□□□ -0.84
USH2AO75445 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
USH2AO75445 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
USH2AO75445 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC9.8□□□□□ -0.84
USH2AO75445 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC9.8□□□□□ -0.84
USH2AO75445 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
USH2AO75445 EI24-204ENST00000527235 1625 ntTSL 5 BASIC9.8□□□□□ -0.84
USH2AO75445 AC010501.1-201ENST00000606270 1962 ntBASIC9.8□□□□□ -0.84
USH2AO75445 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
USH2AO75445 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
USH2AO75445 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC9.8□□□□□ -0.84
USH2AO75445 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC9.8□□□□□ -0.84
USH2AO75445 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
USH2AO75445 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
USH2AO75445 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
USH2AO75445 ALDH1A3-203ENST00000557963 1670 ntBASIC9.8□□□□□ -0.84
USH2AO75445 PXK-203ENST00000383715 1756 ntTSL 5 BASIC9.79□□□□□ -0.84
USH2AO75445 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
USH2AO75445 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
USH2AO75445 MFF-207ENST00000409565 1548 ntTSL 2 BASIC9.79□□□□□ -0.84
USH2AO75445 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
USH2AO75445 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
USH2AO75445 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC9.79□□□□□ -0.84
USH2AO75445 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
USH2AO75445 CYP2T3P-201ENST00000601990 817 ntBASIC9.79□□□□□ -0.84
USH2AO75445 AC016405.3-201ENST00000607710 860 ntBASIC9.79□□□□□ -0.84
USH2AO75445 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC9.79□□□□□ -0.84
USH2AO75445 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
USH2AO75445 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
USH2AO75445 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
USH2AO75445 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
USH2AO75445 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
USH2AO75445 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
USH2AO75445 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
USH2AO75445 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC9.79□□□□□ -0.84
USH2AO75445 AC097658.1-201ENST00000475555 843 ntBASIC9.79□□□□□ -0.84
USH2AO75445 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC9.79□□□□□ -0.84
USH2AO75445 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC9.79□□□□□ -0.84
USH2AO75445 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC9.79□□□□□ -0.84
USH2AO75445 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC9.79□□□□□ -0.84
USH2AO75445 AL512625.2-201ENST00000417533 625 ntBASIC9.79□□□□□ -0.84
USH2AO75445 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC9.79□□□□□ -0.84
USH2AO75445 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC9.79□□□□□ -0.84
USH2AO75445 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC9.79□□□□□ -0.84
USH2AO75445 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
USH2AO75445 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
USH2AO75445 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
USH2AO75445 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC9.79□□□□□ -0.84
USH2AO75445 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC9.79□□□□□ -0.84
USH2AO75445 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC9.79□□□□□ -0.84
USH2AO75445 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC9.79□□□□□ -0.84
USH2AO75445 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC9.79□□□□□ -0.84
USH2AO75445 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC9.79□□□□□ -0.84
USH2AO75445 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC9.79□□□□□ -0.84
USH2AO75445 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC9.79□□□□□ -0.84
USH2AO75445 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
USH2AO75445 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
USH2AO75445 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC9.78□□□□□ -0.84
USH2AO75445 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
USH2AO75445 TPM1-226ENST00000560959 925 ntTSL 2 BASIC9.78□□□□□ -0.84
USH2AO75445 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC9.78□□□□□ -0.84
USH2AO75445 AC013268.1-206ENST00000638368 961 ntBASIC9.78□□□□□ -0.84
USH2AO75445 AC112229.1-201ENST00000639295 961 ntBASIC9.78□□□□□ -0.84
USH2AO75445 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC9.78□□□□□ -0.84
USH2AO75445 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
USH2AO75445 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
USH2AO75445 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC9.78□□□□□ -0.84
USH2AO75445 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC9.78□□□□□ -0.84
USH2AO75445 LSR-205ENST00000427250 1606 ntTSL 2 BASIC9.78□□□□□ -0.84
USH2AO75445 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
USH2AO75445 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC9.78□□□□□ -0.84
USH2AO75445 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
USH2AO75445 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC9.78□□□□□ -0.84
USH2AO75445 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC9.78□□□□□ -0.84
USH2AO75445 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC9.78□□□□□ -0.84
USH2AO75445 MIR6089-201ENST00000616698 64 ntBASIC9.78□□□□□ -0.84
USH2AO75445 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
USH2AO75445 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC9.78□□□□□ -0.84
USH2AO75445 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC9.78□□□□□ -0.84
USH2AO75445 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
USH2AO75445 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
USH2AO75445 AC008403.3-201ENST00000598924 454 ntBASIC9.78□□□□□ -0.84
USH2AO75445 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
USH2AO75445 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC9.77□□□□□ -0.84
USH2AO75445 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.84
USH2AO75445 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms