Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
OPHN1O60890 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
OPHN1O60890 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
OPHN1O60890 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
OPHN1O60890 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
OPHN1O60890 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
OPHN1O60890 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
OPHN1O60890 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
OPHN1O60890 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC22.44■■□□□ 1.18
OPHN1O60890 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC22.44■■□□□ 1.18
OPHN1O60890 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
OPHN1O60890 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
OPHN1O60890 STK25-234ENST00000535007 2459 ntTSL 2 BASIC22.44■■□□□ 1.18
OPHN1O60890 AC139530.1-201ENST00000575312 1977 ntBASIC22.44■■□□□ 1.18
OPHN1O60890 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
OPHN1O60890 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
OPHN1O60890 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
OPHN1O60890 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC22.43■■□□□ 1.18
OPHN1O60890 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
OPHN1O60890 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
OPHN1O60890 AC080038.3-201ENST00000623346 1952 ntBASIC22.43■■□□□ 1.18
OPHN1O60890 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
OPHN1O60890 GTSE1-AS1-202ENST00000623117 1518 ntBASIC22.43■■□□□ 1.18
OPHN1O60890 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
OPHN1O60890 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC22.43■■□□□ 1.18
OPHN1O60890 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
OPHN1O60890 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
OPHN1O60890 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC22.43■■□□□ 1.18
OPHN1O60890 BX842568.3-201ENST00000418104 571 ntBASIC22.43■■□□□ 1.18
OPHN1O60890 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC22.43■■□□□ 1.18
OPHN1O60890 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC22.43■■□□□ 1.18
OPHN1O60890 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
OPHN1O60890 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
OPHN1O60890 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
OPHN1O60890 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
OPHN1O60890 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC22.43■■□□□ 1.18
OPHN1O60890 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
OPHN1O60890 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC22.43■■□□□ 1.18
OPHN1O60890 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC22.42■■□□□ 1.18
OPHN1O60890 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
OPHN1O60890 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC22.42■■□□□ 1.18
OPHN1O60890 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
OPHN1O60890 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC22.42■■□□□ 1.18
OPHN1O60890 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
OPHN1O60890 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC22.42■■□□□ 1.18
OPHN1O60890 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
OPHN1O60890 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC22.42■■□□□ 1.18
OPHN1O60890 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC22.42■■□□□ 1.18
OPHN1O60890 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC22.42■■□□□ 1.18
OPHN1O60890 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
OPHN1O60890 AC022517.1-201ENST00000592429 346 ntBASIC22.42■■□□□ 1.18
OPHN1O60890 IKBKGP1-201ENST00000612193 1073 ntBASIC22.42■■□□□ 1.18
OPHN1O60890 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC22.42■■□□□ 1.18
OPHN1O60890 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
OPHN1O60890 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
OPHN1O60890 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
OPHN1O60890 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC22.42■■□□□ 1.18
OPHN1O60890 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
OPHN1O60890 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
OPHN1O60890 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC22.42■■□□□ 1.18
OPHN1O60890 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
OPHN1O60890 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC22.41■■□□□ 1.18
OPHN1O60890 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
OPHN1O60890 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
OPHN1O60890 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
OPHN1O60890 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
OPHN1O60890 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC22.41■■□□□ 1.18
OPHN1O60890 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC22.41■■□□□ 1.18
OPHN1O60890 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC22.41■■□□□ 1.18
OPHN1O60890 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
OPHN1O60890 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
OPHN1O60890 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
OPHN1O60890 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
OPHN1O60890 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC22.4■■□□□ 1.18
OPHN1O60890 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
OPHN1O60890 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC22.4■■□□□ 1.18
OPHN1O60890 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC22.4■■□□□ 1.18
OPHN1O60890 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
OPHN1O60890 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
OPHN1O60890 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC22.4■■□□□ 1.18
OPHN1O60890 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC22.4■■□□□ 1.18
OPHN1O60890 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC22.4■■□□□ 1.18
OPHN1O60890 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC22.4■■□□□ 1.18
OPHN1O60890 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
OPHN1O60890 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC22.4■■□□□ 1.18
OPHN1O60890 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
OPHN1O60890 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.18
OPHN1O60890 AC092053.2-201ENST00000640557 1818 ntBASIC22.39■■□□□ 1.17
OPHN1O60890 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC22.39■■□□□ 1.17
OPHN1O60890 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC22.39■■□□□ 1.17
OPHN1O60890 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC22.39■■□□□ 1.17
OPHN1O60890 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC22.39■■□□□ 1.17
OPHN1O60890 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
OPHN1O60890 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
OPHN1O60890 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC22.38■■□□□ 1.17
OPHN1O60890 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
OPHN1O60890 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC22.38■■□□□ 1.17
OPHN1O60890 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
OPHN1O60890 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC22.38■■□□□ 1.17
OPHN1O60890 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms